Report Type: Expression Report Date: 04:16PM 06/03/2006 ______________________________________________________________________ Filename: Endosp2.CHP Probe Array Type: Soybean Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 1.320 Scale Factor (SF): 25.003 TGT Value: 500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 41.34 Std: 0.27 Min: 40.70 Max: 41.90 Noise: Avg: 1.87 Std: 0.03 Min: 1.80 Max: 2.00 Corner+ Avg: 596 Count: 32 Corner- Avg: 17363 Count: 32 Central- Avg: 18303 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 61078 Number Present: 14114 23.1% Number Absent: 46260 75.7% Number Marginal: 704 1.2% Average Signal (P): 4734.3 Average Signal (A): 114.6 Average Signal (M): 449.2 Average Signal (All): 1186.0 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BIOB 9204.2 P 17407.5 P 12794.5 P 13135.43 1.39 AFFX-BIOC 22144.1 P 18399.0 P 20271.54 0.83 AFFX-BIOD 43645.6 P 78992.5 P 61319.05 1.81 AFFX-CRE 259116.3 P 270106.5 P 264611.38 1.04 AFFX-DAP 175.7 A 29.9 A 18.0 A 74.56 0.10 AFFX-LYS 47.4 A 43.7 A 27.3 A 39.48 0.58 AFFX-PHE 20.7 A 21.6 A 22.8 A 21.67 1.10 AFFX-THR 106.4 A 50.7 A 14.9 A 57.34 0.14 AFFX-TRP 38.6 A 48.5 A 44.9 A 43.98 1.17 AFFX-R2-EC-BIOB 14801.2 P 17684.0 P 16989.4 P 16491.54 1.15 AFFX-R2-EC-BIOC 28815.5 P 26437.2 P 27626.33 0.92 AFFX-R2-EC-BIOD 121569.7 P 167654.4 P 144612.06 1.38 AFFX-R2-P1-CRE 275769.0 P 344055.6 P 309912.31 1.25 AFFX-R2-BS-DAP 21.3 A 4.3 A 27.0 A 17.54 1.27 AFFX-R2-BS-LYS 105.5 A 5.7 A 227.3 P 112.83 2.15 AFFX-R2-BS-PHE 250.6 A 8.6 A 17.6 A 92.26 0.07 AFFX-R2-BS-THR 208.6 A 265.1 A 283.8 A 252.48 1.36 ______________________________________________________________________