Report Type: Expression Report Date: 04:16PM 06/03/2006 ______________________________________________________________________ Filename: Endosp5.CHP Probe Array Type: Soybean Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 1.400 Scale Factor (SF): 12.491 TGT Value: 500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 42.55 Std: 0.32 Min: 41.70 Max: 43.80 Noise: Avg: 2.02 Std: 0.03 Min: 1.90 Max: 2.10 Corner+ Avg: 838 Count: 32 Corner- Avg: 25155 Count: 32 Central- Avg: 25044 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 61078 Number Present: 15944 26.1% Number Absent: 44381 72.7% Number Marginal: 753 1.2% Average Signal (P): 3993.6 Average Signal (A): 69.2 Average Signal (M): 291.6 Average Signal (All): 1096.4 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BIOB 8653.0 P 14884.4 P 11700.2 P 11745.89 1.35 AFFX-BIOC 24248.0 P 19988.9 P 22118.48 0.82 AFFX-BIOD 43944.4 P 69085.1 P 56514.76 1.57 AFFX-CRE 170418.2 P 184167.4 P 177292.78 1.08 AFFX-DAP 85.5 A 118.9 A 5.7 A 70.05 0.07 AFFX-LYS 41.7 A 44.6 A 44.5 A 43.62 1.07 AFFX-PHE 13.5 A 11.8 A 29.8 A 18.36 2.21 AFFX-THR 11.8 A 12.5 A 21.2 A 15.17 1.80 AFFX-TRP 18.7 A 13.6 A 11.2 A 14.49 0.60 AFFX-R2-EC-BIOB 15679.6 P 16358.5 P 14335.0 P 15457.74 0.91 AFFX-R2-EC-BIOC 32782.5 P 28289.8 P 30536.15 0.86 AFFX-R2-EC-BIOD 96023.8 P 119708.0 P 107865.92 1.25 AFFX-R2-P1-CRE 175265.1 P 238644.1 P 206954.63 1.36 AFFX-R2-BS-DAP 4.5 A 70.6 A 44.9 A 39.98 9.95 AFFX-R2-BS-LYS 12.0 A 2.0 A 134.5 A 49.51 11.26 AFFX-R2-BS-PHE 33.2 A 4.6 A 34.2 A 24.02 1.03 AFFX-R2-BS-THR 23.2 A 36.0 A 21.0 A 26.71 0.90 ______________________________________________________________________