Report Type: Expression Report Date: 06:27PM 12/05/2006 ______________________________________________________________________ Filename: Soybean Heart EP2.CHP Probe Array Type: Soybean Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 2.050 Scale Factor (SF): 6.060 TGT Value: 500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 61.27 Std: 1.10 Min: 58.80 Max: 64.90 Noise: Avg: 3.33 Std: 0.10 Min: 3.10 Max: 3.60 Corner+ Avg: 584 Count: 32 Corner- Avg: 19094 Count: 32 Central- Avg: 18345 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 61078 Number Present: 18598 30.4% Number Absent: 41739 68.3% Number Marginal: 741 1.2% Average Signal (P): 2953.7 Average Signal (A): 55.9 Average Signal (M): 189.1 Average Signal (All): 939.8 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BIOB 2567.2 P 4565.6 P 3013.0 P 3381.94 1.17 AFFX-BIOC 9071.8 P 7266.4 P 8169.06 0.80 AFFX-BIOD 14737.2 P 23066.4 P 18901.79 1.57 AFFX-CRE 60375.0 P 66712.9 P 63543.95 1.10 AFFX-DAP 51.3 A 45.0 A 9.6 A 35.30 0.19 AFFX-LYS 20.6 A 73.1 A 9.8 A 34.50 0.48 AFFX-PHE 12.8 A 56.5 A 93.2 A 54.17 7.30 AFFX-THR 4.4 A 35.4 A 25.3 A 21.68 5.81 AFFX-TRP 37.7 A 2.9 A 61.7 A 34.10 1.64 AFFX-R2-EC-BIOB 4833.6 P 4605.3 P 3545.0 P 4327.95 0.73 AFFX-R2-EC-BIOC 10839.1 P 9693.6 P 10266.33 0.89 AFFX-R2-EC-BIOD 33798.1 P 38436.6 P 36117.36 1.14 AFFX-R2-P1-CRE 68167.2 P 84405.4 P 76286.31 1.24 AFFX-R2-BS-DAP 6.1 A 3.0 A 2.3 A 3.83 0.38 AFFX-R2-BS-LYS 33.4 A 13.7 A 100.7 P 49.24 3.01 AFFX-R2-BS-PHE 4.3 A 68.3 A 10.2 A 27.64 2.37 AFFX-R2-BS-THR 49.1 A 11.0 A 19.4 A 26.51 0.39 ______________________________________________________________________