Report Type: Expression Report Date: 03:11PM 01/19/2007 ______________________________________________________________________ Filename: Soybean Heart EP3.CHP Probe Array Type: Soybean Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 1.190 Scale Factor (SF): 8.677 TGT Value: 500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 42.01 Std: 0.49 Min: 40.50 Max: 43.40 Noise: Avg: 1.63 Std: 0.03 Min: 1.50 Max: 1.70 Corner+ Avg: 155 Count: 32 Corner- Avg: 4452 Count: 32 Central- Avg: 4697 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 61078 Number Present: 19543 32.0% Number Absent: 40864 66.9% Number Marginal: 671 1.1% Average Signal (P): 2591.5 Average Signal (A): 43.6 Average Signal (M): 163.1 Average Signal (All): 860.2 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BIOB 1560.2 P 1995.6 P 1424.0 P 1659.93 0.91 AFFX-BIOC 4838.6 P 4464.0 P 4651.27 0.92 AFFX-BIOD 8685.3 P 12246.9 P 10466.10 1.41 AFFX-CRE 40631.3 P 40627.5 P 40629.43 1.00 AFFX-DAP 21.2 A 31.7 A 4.4 A 19.11 0.21 AFFX-LYS 23.7 A 11.1 A 4.7 A 13.17 0.20 AFFX-PHE 7.8 A 9.7 A 17.2 A 11.56 2.20 AFFX-THR 27.1 A 20.2 A 10.8 A 19.36 0.40 AFFX-TRP 9.1 A 35.1 A 1.9 A 15.39 0.20 AFFX-R2-EC-BIOB 3012.5 P 2673.9 P 1878.3 P 2521.58 0.62 AFFX-R2-EC-BIOC 5936.4 P 5372.0 P 5654.21 0.90 AFFX-R2-EC-BIOD 18914.2 P 22515.3 P 20714.79 1.19 AFFX-R2-P1-CRE 44042.1 P 56540.9 P 50291.47 1.28 AFFX-R2-BS-DAP 1.5 A 17.5 A 11.3 A 10.12 7.50 AFFX-R2-BS-LYS 3.2 A 33.9 A 47.6 A 28.26 14.70 AFFX-R2-BS-PHE 10.0 A 3.2 A 27.4 A 13.53 2.74 AFFX-R2-BS-THR 59.3 A 11.5 A 39.4 A 36.70 0.66 ______________________________________________________________________