Report Type: Expression Report Date: 03:45PM 12/14/2006 ______________________________________________________________________ Filename: Soybean Heart EPD2.CHP Probe Array Type: Soybean Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 1.680 Scale Factor (SF): 11.751 TGT Value: 500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 54.23 Std: 0.76 Min: 52.80 Max: 56.20 Noise: Avg: 2.45 Std: 0.08 Min: 2.30 Max: 2.70 Corner+ Avg: 469 Count: 32 Corner- Avg: 16487 Count: 32 Central- Avg: 15811 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 61078 Number Present: 17857 29.2% Number Absent: 42531 69.6% Number Marginal: 690 1.1% Average Signal (P): 3131.8 Average Signal (A): 64.3 Average Signal (M): 244.1 Average Signal (All): 963.2 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BIOB 3929.3 P 6476.8 P 4528.9 P 4978.34 1.15 AFFX-BIOC 12675.6 P 11138.4 P 11907.01 0.88 AFFX-BIOD 25064.5 P 35135.1 P 30099.75 1.40 AFFX-CRE 101439.4 P 106748.4 P 104093.91 1.05 AFFX-DAP 70.7 A 82.1 A 24.8 A 59.22 0.35 AFFX-LYS 30.5 A 45.5 A 4.2 A 26.77 0.14 AFFX-PHE 9.4 A 22.0 A 21.1 A 17.49 2.24 AFFX-THR 8.9 A 9.2 A 15.6 A 11.23 1.75 AFFX-TRP 75.3 A 72.2 A 13.6 A 53.70 0.18 AFFX-R2-EC-BIOB 6718.3 P 7173.0 P 5972.5 P 6621.25 0.89 AFFX-R2-EC-BIOC 16400.2 P 14920.9 P 15660.52 0.91 AFFX-R2-EC-BIOD 54432.0 P 59480.4 P 56956.18 1.09 AFFX-R2-P1-CRE 109027.1 P 134130.5 P 121578.81 1.23 AFFX-R2-BS-DAP 30.7 A 89.9 A 79.6 A 66.75 2.60 AFFX-R2-BS-LYS 85.5 A 96.3 A 296.1 A 159.30 3.47 AFFX-R2-BS-PHE 42.1 A 78.5 A 193.9 A 104.84 4.60 AFFX-R2-BS-THR 120.4 A 14.6 A 18.6 A 51.20 0.15 ______________________________________________________________________