Report Type: Expression Report Date: 06:27PM 12/05/2006 ______________________________________________________________________ Filename: Soybean Heart Hilum2.CHP Probe Array Type: Soybean Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 1.980 Scale Factor (SF): 6.000 TGT Value: 500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 63.94 Std: 0.49 Min: 62.10 Max: 64.90 Noise: Avg: 2.99 Std: 0.07 Min: 2.80 Max: 3.20 Corner+ Avg: 540 Count: 32 Corner- Avg: 17102 Count: 32 Central- Avg: 16897 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 61078 Number Present: 19077 31.2% Number Absent: 41358 67.7% Number Marginal: 643 1.1% Average Signal (P): 2764.8 Average Signal (A): 45.8 Average Signal (M): 174.5 Average Signal (All): 896.4 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BIOB 1872.7 P 3308.5 P 2088.9 P 2423.38 1.12 AFFX-BIOC 6534.5 P 5177.5 P 5856.02 0.79 AFFX-BIOD 11277.4 P 17936.4 P 14606.88 1.59 AFFX-CRE 52089.5 P 58082.7 P 55086.10 1.12 AFFX-DAP 27.7 A 27.1 A 8.5 A 21.10 0.31 AFFX-LYS 44.4 A 12.1 A 4.7 A 20.39 0.11 AFFX-PHE 4.6 A 28.6 A 12.8 A 15.32 2.82 AFFX-THR 10.7 A 8.0 A 17.0 A 11.90 1.59 AFFX-TRP 9.9 A 41.5 A 22.7 A 24.68 2.31 AFFX-R2-EC-BIOB 3714.6 P 3570.0 P 2972.4 P 3418.99 0.80 AFFX-R2-EC-BIOC 7924.4 P 6560.0 P 7242.20 0.83 AFFX-R2-EC-BIOD 27796.5 P 29946.8 P 28871.64 1.08 AFFX-R2-P1-CRE 60234.1 P 72169.3 P 66201.68 1.20 AFFX-R2-BS-DAP 5.6 A 7.2 A 2.6 A 5.17 0.47 AFFX-R2-BS-LYS 25.1 A 1.9 A 39.8 A 22.26 1.59 AFFX-R2-BS-PHE 10.4 A 16.2 A 12.0 A 12.87 1.16 AFFX-R2-BS-THR 43.9 A 13.0 A 55.5 A 37.47 1.26 ______________________________________________________________________