Report Type: Expression Report Date: 01:12PM 08/17/2006 ______________________________________________________________________ Filename: Soybean Endothelium 3.CHP Probe Array Type: Soybean Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 2.250 Scale Factor (SF): 10.059 TGT Value: 500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 68.04 Std: 0.62 Min: 66.10 Max: 70.10 Noise: Avg: 3.34 Std: 0.05 Min: 3.20 Max: 3.50 Corner+ Avg: 619 Count: 32 Corner- Avg: 22353 Count: 32 Central- Avg: 21942 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 61078 Number Present: 16501 27.0% Number Absent: 43842 71.8% Number Marginal: 735 1.2% Average Signal (P): 3437.6 Average Signal (A): 75.4 Average Signal (M): 280.5 Average Signal (All): 986.2 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BIOB 4323.3 P 6873.9 P 5396.7 P 5531.28 1.25 AFFX-BIOC 13221.0 P 10951.3 P 12086.16 0.83 AFFX-BIOD 23122.2 P 43164.2 P 33143.19 1.87 AFFX-CRE 102174.5 P 103530.7 P 102852.57 1.01 AFFX-DAP 55.4 A 28.9 A 12.3 A 32.21 0.22 AFFX-LYS 22.5 A 13.1 A 40.0 A 25.23 1.78 AFFX-PHE 5.6 A 17.1 A 19.1 A 13.94 3.41 AFFX-THR 10.9 A 115.3 A 24.2 A 50.13 2.22 AFFX-TRP 147.0 A 84.4 A 68.0 A 99.79 0.46 AFFX-R2-EC-BIOB 6900.5 P 7846.2 P 6208.3 P 6985.00 0.90 AFFX-R2-EC-BIOC 15849.6 P 14976.5 P 15413.06 0.94 AFFX-R2-EC-BIOD 56658.2 P 74846.7 P 65752.48 1.32 AFFX-R2-P1-CRE 115519.3 P 139870.3 P 127694.81 1.21 AFFX-R2-BS-DAP 21.1 A 61.4 A 22.6 A 35.03 1.07 AFFX-R2-BS-LYS 49.9 A 107.0 A 107.1 P 87.99 2.14 AFFX-R2-BS-PHE 61.8 A 86.4 A 23.1 A 57.11 0.37 AFFX-R2-BS-THR 87.2 A 78.0 A 119.7 A 94.96 1.37 ______________________________________________________________________