Report Type: Expression Report Date: 01:54PM 06/28/2006 ______________________________________________________________________ Filename: Soy Endothelium 5.CHP Probe Array Type: Soybean Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 1.640 Scale Factor (SF): 16.772 TGT Value: 500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 52.50 Std: 0.69 Min: 50.50 Max: 53.90 Noise: Avg: 2.40 Std: 0.06 Min: 2.30 Max: 2.60 Corner+ Avg: 779 Count: 32 Corner- Avg: 20793 Count: 32 Central- Avg: 20813 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 61078 Number Present: 14311 23.4% Number Absent: 46177 75.6% Number Marginal: 590 1.0% Average Signal (P): 4218.7 Average Signal (A): 84.5 Average Signal (M): 360.9 Average Signal (All): 1055.8 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BIOB 5773.9 P 10105.8 P 7462.1 P 7780.60 1.29 AFFX-BIOC 16641.7 P 11107.9 P 13874.79 0.67 AFFX-BIOD 29605.4 P 50790.3 P 40197.86 1.72 AFFX-CRE 149490.1 P 149262.3 P 149376.19 1.00 AFFX-DAP 142.0 A 35.1 A 20.0 A 65.70 0.14 AFFX-LYS 10.0 A 23.8 A 18.9 A 17.56 1.88 AFFX-PHE 31.6 A 34.5 A 24.0 A 30.03 0.76 AFFX-THR 29.7 A 7.6 A 25.7 A 20.99 0.86 AFFX-TRP 20.8 A 25.0 A 140.7 A 62.18 6.77 AFFX-R2-EC-BIOB 8554.6 P 10200.9 P 10061.8 P 9605.75 1.18 AFFX-R2-EC-BIOC 18152.7 P 17887.8 P 18020.28 0.99 AFFX-R2-EC-BIOD 78859.9 P 82798.5 P 80829.19 1.05 AFFX-R2-P1-CRE 166266.9 P 192871.2 P 179569.05 1.16 AFFX-R2-BS-DAP 57.5 A 153.0 A 8.3 A 72.92 0.14 AFFX-R2-BS-LYS 38.0 A 3.5 A 225.4 A 88.98 5.92 AFFX-R2-BS-PHE 24.9 A 64.1 A 15.5 A 34.85 0.62 AFFX-R2-BS-THR 153.6 P 170.6 A 58.1 A 127.41 0.38 ______________________________________________________________________