Report Type: Expression Report Date: 02:20PM 11/15/2005 ______________________________________________________________________ Filename: LMD SRB EP1.CHP Probe Array Type: Soybean Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 1.350 Scale Factor (SF): 46.688 TGT Value: 500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 41.01 Std: 0.45 Min: 40.10 Max: 42.50 Noise: Avg: 1.85 Std: 0.06 Min: 1.70 Max: 2.00 Corner+ Avg: 523 Count: 32 Corner- Avg: 21712 Count: 32 Central- Avg: 21366 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 61078 Number Present: 7725 12.6% Number Absent: 52441 85.9% Number Marginal: 912 1.5% Average Signal (P): 7523.6 Average Signal (A): 319.3 Average Signal (M): 1199.2 Average Signal (All): 1243.6 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BioB 13604.7 P 25890.5 P 17006.1 P 18833.81 1.25 AFFX-BioC 42283.1 P 27658.4 P 34970.78 0.65 AFFX-BioD 52553.9 P 166936.0 P 109744.92 3.18 AFFX-Cre 422071.6 P 455839.2 P 438955.38 1.08 AFFX-Dap 312.1 A 310.0 A 35.7 A 219.28 0.11 AFFX-Lys 377.4 A 95.9 A 49.7 A 174.33 0.13 AFFX-Phe 70.9 A 22.3 A 300.8 A 131.31 4.24 AFFX-Thr 189.1 A 131.2 A 420.3 A 246.85 2.22 AFFX-Trp 154.3 A 55.1 A 19.2 A 76.19 0.12 AFFX-r2-Ec-bioB 19850.3 P 27957.8 P 19370.3 P 22392.80 0.98 AFFX-r2-Ec-bioC 46118.0 P 47294.5 P 46706.24 1.03 AFFX-r2-Ec-bioD 175453.0 P 161233.0 P 168342.97 0.92 AFFX-r2-P1-cre 518822.5 P 597056.0 P 557939.25 1.15 AFFX-r2-Bs-dap 15.0 A 43.8 A 39.3 A 32.70 2.63 AFFX-r2-Bs-lys 10.9 A 12.8 A 282.6 A 102.08 25.93 AFFX-r2-Bs-phe 107.3 A 141.5 A 48.3 A 99.03 0.45 AFFX-r2-Bs-thr 226.7 A 57.7 A 49.3 A 111.21 0.22 ______________________________________________________________________