Report Type: Expression Report Date: 02:20PM 11/15/2005 ______________________________________________________________________ Filename: LMD SRB EP2.CHP Probe Array Type: Soybean Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 1.390 Scale Factor (SF): 44.523 TGT Value: 500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 42.04 Std: 0.34 Min: 41.10 Max: 43.00 Noise: Avg: 1.87 Std: 0.05 Min: 1.70 Max: 2.10 Corner+ Avg: 739 Count: 32 Corner- Avg: 25713 Count: 32 Central- Avg: 25172 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 61078 Number Present: 7981 13.1% Number Absent: 52184 85.4% Number Marginal: 913 1.5% Average Signal (P): 7979.3 Average Signal (A): 322.2 Average Signal (M): 1186.7 Average Signal (All): 1335.6 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BioB 19031.2 P 32657.2 P 20658.1 P 24115.52 1.09 AFFX-BioC 53751.8 P 36973.0 P 45362.41 0.69 AFFX-BioD 73493.0 P 224484.4 P 148988.66 3.05 AFFX-Cre 527119.8 P 577915.9 P 552517.88 1.10 AFFX-Dap 99.1 A 87.3 A 78.2 A 88.20 0.79 AFFX-Lys 251.2 A 209.7 A 44.0 A 168.32 0.18 AFFX-Phe 59.5 A 18.6 A 361.7 A 146.62 6.08 AFFX-Thr 91.3 A 54.5 A 156.7 A 100.81 1.72 AFFX-Trp 288.5 A 35.4 A 17.7 A 113.88 0.06 AFFX-r2-Ec-bioB 25932.3 P 37464.1 P 28856.7 P 30751.04 1.11 AFFX-r2-Ec-bioC 57705.6 P 60208.7 P 58957.16 1.04 AFFX-r2-Ec-bioD 237194.6 P 291971.7 P 264583.16 1.23 AFFX-r2-P1-cre 622759.1 P 758279.6 P 690519.38 1.22 AFFX-r2-Bs-dap 94.4 A 11.2 A 85.9 A 63.85 0.91 AFFX-r2-Bs-lys 93.1 A 22.3 A 309.7 A 141.71 3.33 AFFX-r2-Bs-phe 252.9 A 88.8 A 39.7 A 127.13 0.16 AFFX-r2-Bs-thr 678.8 P 396.1 A 130.4 A 401.77 0.19 ______________________________________________________________________