Report Type: Expression Report Date: 02:20PM 11/15/2005 ______________________________________________________________________ Filename: LMD SRB Sus2.CHP Probe Array Type: Soybean Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 1.110 Scale Factor (SF): 99.629 TGT Value: 500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 36.85 Std: 0.50 Min: 35.90 Max: 38.00 Noise: Avg: 1.31 Std: 0.04 Min: 1.20 Max: 1.40 Corner+ Avg: 831 Count: 32 Corner- Avg: 28624 Count: 32 Central- Avg: 27407 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 61078 Number Present: 5813 9.5% Number Absent: 54426 89.1% Number Marginal: 839 1.4% Average Signal (P): 9990.3 Average Signal (A): 381.2 Average Signal (M): 1520.5 Average Signal (All): 1311.4 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BioB 50168.5 P 81107.2 P 60508.5 P 63928.06 1.21 AFFX-BioC 153044.4 P 85677.6 P 119361.01 0.56 AFFX-BioD 172462.5 P 541336.6 P 356899.56 3.14 AFFX-Cre 1294862.0 P 1307164.4 P 1301013.25 1.01 AFFX-Dap 354.0 A 432.3 A 88.5 A 291.57 0.25 AFFX-Lys 210.3 A 48.6 A 99.1 A 119.33 0.47 AFFX-Phe 120.2 A 97.9 A 281.6 A 166.54 2.34 AFFX-Thr 54.6 A 25.0 A 129.1 A 69.58 2.36 AFFX-Trp 548.4 A 65.2 A 34.7 A 216.11 0.06 AFFX-r2-Ec-bioB 66907.9 P 84463.9 P 85456.1 P 78942.66 1.28 AFFX-r2-Ec-bioC 157400.6 P 161496.0 P 159448.30 1.03 AFFX-r2-Ec-bioD 632941.3 P 580224.1 P 606582.63 0.92 AFFX-r2-P1-cre 1449177.0 P 1717944.9 P 1583561.00 1.19 AFFX-r2-Bs-dap 145.5 A 604.1 A 628.6 A 459.42 4.32 AFFX-r2-Bs-lys 401.9 A 123.4 A 45.2 A 190.17 0.11 AFFX-r2-Bs-phe 14.5 A 35.3 A 971.1 M 340.27 67.20 AFFX-r2-Bs-thr 37.3 A 827.2 A 135.5 A 333.33 3.64 ______________________________________________________________________