Report Type:	Expression Report
Date:          	04:36PM 04/21/2007
______________________________________________________________________

Filename:		Soybean COTY END2.CHP
Probe Array Type:	Soybean
Algorithm:		Statistical
Probe Pair Thr:	8
Controls:		Antisense
______________________________________________________________________

Alpha1:		0.05
Alpha2:		0.065
Tau:		0.015
Noise (RawQ):	1.250
Scale Factor (SF):	10.988
TGT Value:		500
Norm Factor (NF):	1.000
______________________________________________________________________

Background:
	Avg: 43.57	Std: 0.49	Min: 42.00	Max: 44.70
Noise:
	Avg: 1.69	Std: 0.03	Min: 1.50	Max: 1.80
Corner+
	Avg: 176		Count: 32
Corner-
	Avg: 5264		Count: 32
Central-
	Avg: 5401		Count: 9
______________________________________________________________________

The following data represents probe sets that exceed the probe pair threshold 
and are not called "No Call".

Total Probe Sets:	61078
Number Present:	18041	29.5%
Number Absent:	42294	69.2%
Number Marginal:	743	1.2%

Average Signal (P):	3077.8
Average Signal (A):	60.9
Average Signal (M):	218.8
Average Signal (All):	953.9
______________________________________________________________________

Spike Controls:
Probe Set		Sig(5')	Det(5')	Sig(M')	Det(M')	Sig(3')	Det(3')	Sig(all)	Sig(3'/5')
AFFX-BIOB		1134.2	P	1565.1	P	1174.5	P	1291.28	1.04
AFFX-BIOC		3653.5	P	 	 	2694.9	P	3174.22	0.74
AFFX-BIOD		7121.9	P	 	 	12438.6	P	9780.25	1.75
AFFX-CRE		45432.8	P	 	 	50715.6	P	48074.18	1.12
AFFX-DAP		29.1	A	35.3	A	5.8	A	23.40	0.20
AFFX-LYS		4.0	A	20.7	A	40.7	A	21.83	10.11
AFFX-PHE		4.2	A	35.3	A	10.9	A	16.81	2.57
AFFX-THR		15.2	A	13.1	A	9.0	A	12.45	0.59
AFFX-TRP		26.8	A	43.2	A	41.0	A	37.00	1.53
AFFX-R2-EC-BIOB	2275.8	P	2233.5	P	1697.7	P	2069.03	0.75
AFFX-R2-EC-BIOC	4699.4	P	 	 	4261.7	P	4480.55	0.91
AFFX-R2-EC-BIOD	18568.8	P	 	 	24262.8	P	21415.82	1.31
AFFX-R2-P1-CRE	60862.1	P	 	 	69319.3	P	65090.72	1.14
AFFX-R2-BS-DAP	33.7	A	4.2	A	11.0	A	16.30	0.33
AFFX-R2-BS-LYS	86.5	A	9.9	A	131.6	A	76.00	1.52
AFFX-R2-BS-PHE	7.3	A	12.8	A	5.7	A	8.57	0.78
AFFX-R2-BS-THR	36.8	A	140.0	A	63.0	A	79.92	1.71
______________________________________________________________________

