Report Type: Expression Report Date: 06:45PM 04/26/2007 ______________________________________________________________________ Filename: Soybean COTY ENT1.CHP Probe Array Type: Soybean Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 2.540 Scale Factor (SF): 4.683 TGT Value: 500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 85.13 Std: 2.11 Min: 77.60 Max: 89.40 Noise: Avg: 3.99 Std: 0.09 Min: 3.70 Max: 4.20 Corner+ Avg: 528 Count: 32 Corner- Avg: 17918 Count: 32 Central- Avg: 18257 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 61078 Number Present: 19341 31.7% Number Absent: 41002 67.1% Number Marginal: 735 1.2% Average Signal (P): 2645.5 Average Signal (A): 47.3 Average Signal (M): 193.3 Average Signal (All): 871.8 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BIOB 1089.5 P 1448.3 P 1173.9 P 1237.23 1.08 AFFX-BIOC 3275.5 P 2828.8 P 3052.13 0.86 AFFX-BIOD 5988.7 P 12067.4 P 9028.05 2.02 AFFX-CRE 39639.9 P 43067.8 P 41353.84 1.09 AFFX-DAP 3.9 A 67.5 A 3.6 A 24.98 0.93 AFFX-LYS 34.7 A 19.8 A 23.1 A 25.88 0.67 AFFX-PHE 9.0 A 9.5 A 9.1 A 9.16 1.01 AFFX-THR 7.2 A 10.6 A 10.7 A 9.50 1.48 AFFX-TRP 10.8 A 15.9 A 21.7 A 16.12 2.01 AFFX-R2-EC-BIOB 1985.4 P 1710.3 P 1794.4 P 1830.03 0.90 AFFX-R2-EC-BIOC 3981.3 P 3992.6 P 3986.97 1.00 AFFX-R2-EC-BIOD 16939.4 P 22863.8 P 19901.62 1.35 AFFX-R2-P1-CRE 46080.8 P 55933.1 P 51006.93 1.21 AFFX-R2-BS-DAP 3.1 A 3.2 A 36.5 A 14.24 11.91 AFFX-R2-BS-LYS 26.1 A 52.3 A 68.7 P 49.03 2.63 AFFX-R2-BS-PHE 64.8 A 12.1 A 62.0 A 46.28 0.96 AFFX-R2-BS-THR 5.4 A 8.8 A 13.1 A 9.10 2.43 ______________________________________________________________________