Report Type: Expression Report Date: 06:45PM 04/26/2007 ______________________________________________________________________ Filename: Soybean COTY ENT2.CHP Probe Array Type: Soybean Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 2.040 Scale Factor (SF): 6.424 TGT Value: 500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 64.68 Std: 1.99 Min: 60.00 Max: 68.60 Noise: Avg: 3.14 Std: 0.10 Min: 2.90 Max: 3.40 Corner+ Avg: 419 Count: 32 Corner- Avg: 16194 Count: 32 Central- Avg: 16846 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 61078 Number Present: 18482 30.3% Number Absent: 41894 68.6% Number Marginal: 702 1.1% Average Signal (P): 2842.4 Average Signal (A): 51.6 Average Signal (M): 189.8 Average Signal (All): 897.7 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BIOB 1197.8 P 1998.7 P 1483.1 P 1559.85 1.24 AFFX-BIOC 4440.4 P 3464.0 P 3952.20 0.78 AFFX-BIOD 7476.1 P 16173.9 P 11825.00 2.16 AFFX-CRE 46304.9 P 51904.3 P 49104.61 1.12 AFFX-DAP 31.1 A 63.5 A 8.3 A 34.30 0.27 AFFX-LYS 3.5 A 12.4 A 9.2 A 8.37 2.64 AFFX-PHE 13.3 A 25.7 A 13.3 A 17.43 1.00 AFFX-THR 4.5 A 54.2 A 9.5 A 22.75 2.09 AFFX-TRP 13.3 A 14.2 A 7.5 A 11.64 0.56 AFFX-R2-EC-BIOB 2722.4 P 2467.9 P 2282.6 P 2490.95 0.84 AFFX-R2-EC-BIOC 5441.4 P 5920.7 P 5681.05 1.09 AFFX-R2-EC-BIOD 22688.2 P 33016.0 P 27852.09 1.46 AFFX-R2-P1-CRE 57736.3 P 71775.9 P 64756.13 1.24 AFFX-R2-BS-DAP 3.1 A 6.3 A 3.1 A 4.15 1.01 AFFX-R2-BS-LYS 2.8 A 17.0 A 35.7 A 18.49 12.65 AFFX-R2-BS-PHE 4.4 A 7.7 A 126.2 A 46.11 28.96 AFFX-R2-BS-THR 77.0 A 65.5 A 66.0 A 69.51 0.86 ______________________________________________________________________