Report Type:	Expression Report
Date:          	06:46PM 04/26/2007
______________________________________________________________________

Filename:		Soybean COTY EPD2.CHP
Probe Array Type:	Soybean
Algorithm:		Statistical
Probe Pair Thr:	8
Controls:		Antisense
______________________________________________________________________

Alpha1:		0.05
Alpha2:		0.065
Tau:		0.015
Noise (RawQ):	1.990
Scale Factor (SF):	9.115
TGT Value:		500
Norm Factor (NF):	1.000
______________________________________________________________________

Background:
	Avg: 65.02	Std: 1.03	Min: 62.70	Max: 68.10
Noise:
	Avg: 3.11	Std: 0.07	Min: 2.90	Max: 3.30
Corner+
	Avg: 467		Count: 32
Corner-
	Avg: 16432		Count: 32
Central-
	Avg: 17133		Count: 9
______________________________________________________________________

The following data represents probe sets that exceed the probe pair threshold 
and are not called "No Call".

Total Probe Sets:	61078
Number Present:	17682	28.9%
Number Absent:	42658	69.8%
Number Marginal:	738	1.2%

Average Signal (P):	3063.6
Average Signal (A):	82.3
Average Signal (M):	313.2
Average Signal (All):	948.1
______________________________________________________________________

Spike Controls:
Probe Set		Sig(5')	Det(5')	Sig(M')	Det(M')	Sig(3')	Det(3')	Sig(all)	Sig(3'/5')
AFFX-BIOB		2427.2	P	4051.0	P	2798.8	P	3092.32	1.15
AFFX-BIOC		8556.9	P	 	 	6494.5	P	7525.70	0.76
AFFX-BIOD		14137.3	P	 	 	28626.7	P	21382.01	2.02
AFFX-CRE		76389.5	P	 	 	80997.0	P	78693.28	1.06
AFFX-DAP		69.2	A	20.6	A	34.3	A	41.39	0.50
AFFX-LYS		7.3	A	100.9	A	96.5	A	68.21	13.30
AFFX-PHE		11.0	A	48.9	A	38.5	A	32.81	3.49
AFFX-THR		12.7	A	16.6	A	21.4	A	16.91	1.68
AFFX-TRP		21.2	A	12.9	A	63.4	A	32.50	2.98
AFFX-R2-EC-BIOB	3610.3	P	4393.6	P	3455.9	P	3819.92	0.96
AFFX-R2-EC-BIOC	9322.0	P	 	 	9046.9	P	9184.47	0.97
AFFX-R2-EC-BIOD	35279.4	P	 	 	47823.2	P	41551.30	1.36
AFFX-R2-P1-CRE	85005.0	P	 	 	108996.5	P	97000.75	1.28
AFFX-R2-BS-DAP	32.8	A	54.4	A	2.9	A	30.03	0.09
AFFX-R2-BS-LYS	2.8	A	2.4	A	123.1	P	42.78	43.57
AFFX-R2-BS-PHE	5.2	A	93.7	A	170.7	A	89.85	33.12
AFFX-R2-BS-THR	133.0	A	55.4	A	24.0	A	70.80	0.18
______________________________________________________________________