Report Type: Expression Report Date: 01:12PM 08/17/2006 ______________________________________________________________________ Filename: Soybean Epidermis 3.CHP Probe Array Type: Soybean Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 1.680 Scale Factor (SF): 28.923 TGT Value: 500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 51.42 Std: 0.32 Min: 50.50 Max: 52.30 Noise: Avg: 2.29 Std: 0.06 Min: 2.20 Max: 2.50 Corner+ Avg: 603 Count: 32 Corner- Avg: 21568 Count: 32 Central- Avg: 21453 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 61078 Number Present: 13213 21.6% Number Absent: 47143 77.2% Number Marginal: 722 1.2% Average Signal (P): 4921.8 Average Signal (A): 127.4 Average Signal (M): 480.0 Average Signal (All): 1168.7 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BIOB 13402.8 P 22503.0 P 17759.1 P 17888.30 1.33 AFFX-BIOC 40606.6 P 32832.2 P 36719.36 0.81 AFFX-BIOD 72177.6 P 132787.7 P 102482.61 1.84 AFFX-CRE 299481.8 P 302860.1 P 301170.94 1.01 AFFX-DAP 40.3 A 9.0 A 83.6 A 44.29 2.08 AFFX-LYS 226.0 P 41.8 A 170.1 A 145.95 0.75 AFFX-PHE 23.8 A 31.7 A 184.2 A 79.89 7.73 AFFX-THR 36.6 A 9.8 A 106.2 A 50.87 2.90 AFFX-TRP 241.3 A 29.9 A 10.2 A 93.80 0.04 AFFX-R2-EC-BIOB 19936.2 P 22333.9 P 22358.5 P 21542.87 1.12 AFFX-R2-EC-BIOC 48149.2 P 45377.2 P 46763.21 0.94 AFFX-R2-EC-BIOD 170024.0 P 217099.5 P 193561.72 1.28 AFFX-R2-P1-CRE 323585.2 P 394585.2 P 359085.19 1.22 AFFX-R2-BS-DAP 39.5 A 166.6 A 22.6 A 76.25 0.57 AFFX-R2-BS-LYS 6.7 A 23.9 A 260.2 A 96.96 38.69 AFFX-R2-BS-PHE 97.7 A 232.3 A 92.2 A 140.76 0.94 AFFX-R2-BS-THR 246.7 A 28.3 A 34.2 A 103.05 0.14 ______________________________________________________________________