Report Type: Expression Report Date: 01:54PM 06/28/2006 ______________________________________________________________________ Filename: Soy Epidermis 5.CHP Probe Array Type: Soybean Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 1.690 Scale Factor (SF): 15.657 TGT Value: 500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 52.43 Std: 0.32 Min: 51.50 Max: 53.40 Noise: Avg: 2.55 Std: 0.06 Min: 2.30 Max: 2.70 Corner+ Avg: 674 Count: 32 Corner- Avg: 19829 Count: 32 Central- Avg: 20777 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 61078 Number Present: 15556 25.5% Number Absent: 44824 73.4% Number Marginal: 698 1.1% Average Signal (P): 3577.7 Average Signal (A): 94.3 Average Signal (M): 373.8 Average Signal (All): 984.7 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BIOB 4378.1 P 6770.9 P 5972.4 P 5707.16 1.36 AFFX-BIOC 12490.6 P 8551.1 P 10520.82 0.68 AFFX-BIOD 20236.8 P 39053.3 P 29645.04 1.93 AFFX-CRE 110803.5 P 114157.6 P 112480.56 1.03 AFFX-DAP 118.6 A 21.5 A 15.0 A 51.70 0.13 AFFX-LYS 103.7 A 13.7 A 28.6 A 48.69 0.28 AFFX-PHE 31.2 A 6.9 A 19.6 A 19.21 0.63 AFFX-THR 13.3 A 17.0 A 18.5 A 16.25 1.39 AFFX-TRP 29.7 A 13.7 A 124.8 A 56.09 4.20 AFFX-R2-EC-BIOB 7559.3 P 8032.0 P 8826.6 P 8139.29 1.17 AFFX-R2-EC-BIOC 14149.3 P 14247.1 P 14198.20 1.01 AFFX-R2-EC-BIOD 57572.6 P 66294.8 P 61933.70 1.15 AFFX-R2-P1-CRE 133625.6 P 162533.5 P 148079.53 1.22 AFFX-R2-BS-DAP 64.6 A 18.6 A 8.4 A 30.54 0.13 AFFX-R2-BS-LYS 90.0 A 7.9 A 90.0 A 62.64 1.00 AFFX-R2-BS-PHE 54.9 A 120.5 A 6.5 A 60.60 0.12 AFFX-R2-BS-THR 72.8 A 112.2 A 120.5 A 101.85 1.65 ______________________________________________________________________