Report Type:	Expression Report
Date:          	06:46PM 04/26/2007
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Filename:		Soybean COTY II1.CHP
Probe Array Type:	Soybean
Algorithm:		Statistical
Probe Pair Thr:	8
Controls:		Antisense
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Alpha1:		0.05
Alpha2:		0.065
Tau:		0.015
Noise (RawQ):	2.340
Scale Factor (SF):	3.795
TGT Value:		500
Norm Factor (NF):	1.000
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Background:
	Avg: 76.11	Std: 2.13	Min: 71.00	Max: 80.70
Noise:
	Avg: 4.34	Std: 0.12	Min: 4.00	Max: 4.70
Corner+
	Avg: 581		Count: 32
Corner-
	Avg: 17796		Count: 32
Central-
	Avg: 17914		Count: 9
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The following data represents probe sets that exceed the probe pair threshold 
and are not called "No Call".

Total Probe Sets:	61078
Number Present:	19073	31.2%
Number Absent:	41156	67.4%
Number Marginal:	849	1.4%

Average Signal (P):	2426.5
Average Signal (A):	77.2
Average Signal (M):	253.8
Average Signal (All):	813.3
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Spike Controls:
Probe Set		Sig(5')	Det(5')	Sig(M')	Det(M')	Sig(3')	Det(3')	Sig(all)	Sig(3'/5')
AFFX-BIOB		833.2	P	1418.5	P	768.9	P	1006.87	0.92
AFFX-BIOC		2906.3	P	 	 	2351.5	P	2628.89	0.81
AFFX-BIOD		4547.3	P	 	 	9776.0	P	7161.65	2.15
AFFX-CRE		29277.8	P	 	 	33190.7	P	31234.26	1.13
AFFX-DAP		58.9	A	100.0	A	6.3	A	55.06	0.11
AFFX-LYS		9.8	A	33.2	A	76.0	A	39.70	7.74
AFFX-PHE		6.4	A	8.0	A	22.6	A	12.34	3.55
AFFX-THR		10.7	A	31.7	A	10.5	A	17.62	0.98
AFFX-TRP		9.5	A	8.5	A	9.2	A	9.08	0.96
AFFX-R2-EC-BIOB	1307.2	P	1686.7	P	1186.9	P	1393.61	0.91
AFFX-R2-EC-BIOC	3585.5	P	 	 	3817.2	P	3701.34	1.06
AFFX-R2-EC-BIOD	13156.6	P	 	 	18546.4	P	15851.51	1.41
AFFX-R2-P1-CRE	34387.5	P	 	 	43788.3	P	39087.92	1.27
AFFX-R2-BS-DAP	11.2	A	34.0	A	27.3	A	24.16	2.44
AFFX-R2-BS-LYS	26.3	A	51.3	A	63.5	M	47.02	2.42
AFFX-R2-BS-PHE	8.5	A	5.8	A	105.9	A	40.09	12.39
AFFX-R2-BS-THR	118.7	A	15.3	A	116.1	A	83.35	0.98
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