Report Type:	Expression Report
Date:          	04:37PM 04/21/2007
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Filename:		Soybean COTY Whole Seed2.CHP
Probe Array Type:	Soybean
Algorithm:		Statistical
Probe Pair Thr:	8
Controls:		Antisense
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Alpha1:		0.05
Alpha2:		0.065
Tau:		0.015
Noise (RawQ):	1.420
Scale Factor (SF):	4.132
TGT Value:		500
Norm Factor (NF):	1.000
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Background:
	Avg: 50.30	Std: 0.50	Min: 48.70	Max: 51.60
Noise:
	Avg: 2.21	Std: 0.07	Min: 2.00	Max: 2.40
Corner+
	Avg: 270		Count: 32
Corner-
	Avg: 8216		Count: 32
Central-
	Avg: 9053		Count: 9
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The following data represents probe sets that exceed the probe pair threshold 
and are not called "No Call".

Total Probe Sets:	61078
Number Present:	22920	37.5%
Number Absent:	37395	61.2%
Number Marginal:	763	1.2%

Average Signal (P):	1938.3
Average Signal (A):	41.1
Average Signal (M):	130.7
Average Signal (All):	754.2
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Spike Controls:
Probe Set		Sig(5')	Det(5')	Sig(M')	Det(M')	Sig(3')	Det(3')	Sig(all)	Sig(3'/5')
AFFX-BIOB		407.4	P	645.0	P	471.0	P	507.81	1.16
AFFX-BIOC		1301.2	P	 	 	1007.9	P	1154.58	0.77
AFFX-BIOD		2415.3	P	 	 	5279.2	P	3847.23	2.19
AFFX-CRE		17977.0	P	 	 	20172.9	P	19074.96	1.12
AFFX-DAP		35.6	A	17.4	A	6.1	A	19.70	0.17
AFFX-LYS		3.3	A	32.8	A	6.6	A	14.23	1.98
AFFX-PHE		4.9	A	4.5	A	8.7	A	6.05	1.77
AFFX-THR		8.3	A	5.4	A	46.3	A	19.99	5.59
AFFX-TRP		6.8	A	19.8	A	31.6	A	19.38	4.67
AFFX-R2-EC-BIOB	889.8	P	776.2	P	593.4	P	753.13	0.67
AFFX-R2-EC-BIOC	1586.8	P	 	 	1667.3	P	1627.06	1.05
AFFX-R2-EC-BIOD	6362.4	P	 	 	9128.2	P	7745.28	1.43
AFFX-R2-P1-CRE	22643.9	P	 	 	28313.1	P	25478.49	1.25
AFFX-R2-BS-DAP	5.2	A	30.0	A	0.8	A	11.97	0.15
AFFX-R2-BS-LYS	2.9	A	21.4	A	98.7	P	40.99	33.83
AFFX-R2-BS-PHE	21.4	A	15.0	A	12.9	A	16.46	0.60
AFFX-R2-BS-THR	39.8	A	19.2	A	28.4	A	29.15	0.71
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