Report Type: Expression Report Date: 04:37PM 04/21/2007 ______________________________________________________________________ Filename: Soybean COTY SUS1.CHP Probe Array Type: Soybean Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 1.230 Scale Factor (SF): 14.578 TGT Value: 500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 40.67 Std: 1.09 Min: 38.40 Max: 43.00 Noise: Avg: 1.71 Std: 0.03 Min: 1.60 Max: 1.80 Corner+ Avg: 225 Count: 32 Corner- Avg: 7650 Count: 32 Central- Avg: 7915 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 61078 Number Present: 16663 27.3% Number Absent: 43718 71.6% Number Marginal: 697 1.1% Average Signal (P): 3399.9 Average Signal (A): 70.2 Average Signal (M): 279.2 Average Signal (All): 981.0 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BIOB 2926.0 P 3134.1 P 2859.6 P 2973.24 0.98 AFFX-BIOC 7571.2 P 6440.4 P 7005.84 0.85 AFFX-BIOD 15971.7 P 26889.9 P 21430.78 1.68 AFFX-CRE 89554.0 P 95482.4 P 92518.19 1.07 AFFX-DAP 43.7 A 129.2 A 4.0 A 58.99 0.09 AFFX-LYS 10.1 A 50.9 A 3.6 A 21.54 0.36 AFFX-PHE 10.9 A 15.2 A 40.8 A 22.30 3.73 AFFX-THR 8.0 A 12.6 A 21.1 A 13.87 2.65 AFFX-TRP 17.9 A 110.1 A 74.6 A 67.54 4.17 AFFX-R2-EC-BIOB 4441.1 P 4576.6 P 3453.3 P 4157.03 0.78 AFFX-R2-EC-BIOC 10254.4 P 12126.5 P 11190.45 1.18 AFFX-R2-EC-BIOD 39432.9 P 58225.0 P 48828.97 1.48 AFFX-R2-P1-CRE 101753.9 P 120331.4 P 111042.66 1.18 AFFX-R2-BS-DAP 23.3 A 4.7 A 2.5 A 10.20 0.11 AFFX-R2-BS-LYS 9.4 A 14.3 A 147.1 P 56.96 15.60 AFFX-R2-BS-PHE 75.5 A 54.4 A 25.8 A 51.89 0.34 AFFX-R2-BS-THR 19.4 A 104.4 A 88.7 A 70.84 4.57 ______________________________________________________________________