Report Type: Expression Report Date: 04:37PM 04/21/2007 ______________________________________________________________________ Filename: Soybean COTY SUS2.CHP Probe Array Type: Soybean Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 1.290 Scale Factor (SF): 9.831 TGT Value: 500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 45.08 Std: 0.40 Min: 43.80 Max: 46.20 Noise: Avg: 1.79 Std: 0.04 Min: 1.70 Max: 1.90 Corner+ Avg: 232 Count: 32 Corner- Avg: 6685 Count: 32 Central- Avg: 7050 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 61078 Number Present: 18481 30.3% Number Absent: 41891 68.6% Number Marginal: 706 1.2% Average Signal (P): 2831.4 Average Signal (A): 60.5 Average Signal (M): 221.5 Average Signal (All): 900.8 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BIOB 1464.1 P 1715.4 P 1401.0 P 1526.83 0.96 AFFX-BIOC 4005.5 P 3460.8 P 3733.12 0.86 AFFX-BIOD 8926.8 P 15347.7 P 12137.21 1.72 AFFX-CRE 50414.5 P 53538.5 P 51976.50 1.06 AFFX-DAP 25.0 A 82.6 A 10.8 A 39.48 0.43 AFFX-LYS 2.7 A 38.8 A 18.0 A 19.84 6.55 AFFX-PHE 3.8 A 4.6 A 23.2 A 10.57 6.07 AFFX-THR 6.2 A 34.5 A 68.3 A 36.35 11.06 AFFX-TRP 22.5 A 15.1 A 4.3 A 14.00 0.19 AFFX-R2-EC-BIOB 2594.0 P 2257.6 P 2170.5 P 2340.71 0.84 AFFX-R2-EC-BIOC 5267.6 P 6440.4 P 5853.98 1.22 AFFX-R2-EC-BIOD 21880.5 P 30066.0 P 25973.25 1.37 AFFX-R2-P1-CRE 59401.8 P 76202.8 P 67802.27 1.28 AFFX-R2-BS-DAP 3.0 A 2.1 A 30.1 A 11.75 10.03 AFFX-R2-BS-LYS 2.0 A 1.5 A 105.4 A 36.30 53.25 AFFX-R2-BS-PHE 84.1 A 20.3 A 32.3 A 45.58 0.38 AFFX-R2-BS-THR 89.8 A 96.1 A 79.2 A 88.37 0.88 ______________________________________________________________________