Report Type:	Expression Report
Date:          	12:50PM 05/16/2007
______________________________________________________________________

Filename:		Soybean  EM Seed Coat Parenchyma1.CHP
Probe Array Type:	Soybean
Algorithm:		Statistical
Probe Pair Thr:	8
Controls:		Antisense
______________________________________________________________________

Alpha1:		0.05
Alpha2:		0.065
Tau:		0.015
Noise (RawQ):	1.590
Scale Factor (SF):	5.973
TGT Value:		500
Norm Factor (NF):	1.000
______________________________________________________________________

Background:
	Avg: 53.18	Std: 0.35	Min: 52.30	Max: 54.60
Noise:
	Avg: 2.40	Std: 0.06	Min: 2.20	Max: 2.60
Corner+
	Avg: 396		Count: 32
Corner-
	Avg: 13036		Count: 32
Central-
	Avg: 12777		Count: 9
______________________________________________________________________

The following data represents probe sets that exceed the probe pair threshold 
and are not called "No Call".

Total Probe Sets:	61078
Number Present:	19737	32.3%
Number Absent:	40632	66.5%
Number Marginal:	709	1.2%

Average Signal (P):	2581.3
Average Signal (A):	51.9
Average Signal (M):	196.3
Average Signal (All):	870.9
______________________________________________________________________

Spike Controls:
Probe Set		Sig(5')	Det(5')	Sig(M')	Det(M')	Sig(3')	Det(3')	Sig(all)	Sig(3'/5')
AFFX-BIOB		971.5	P	1365.5	P	1082.4	P	1139.81	1.11
AFFX-BIOC		3059.8	P	 	 	2994.2	P	3026.98	0.98
AFFX-BIOD		5607.3	P	 	 	11787.2	P	8697.25	2.10
AFFX-CRE		35532.9	P	 	 	37952.0	P	36742.44	1.07
AFFX-DAP		5.6	A	29.3	A	4.7	A	13.21	0.84
AFFX-LYS		4.0	A	82.3	A	7.5	A	31.27	1.90
AFFX-PHE		6.8	A	4.4	A	13.2	A	8.15	1.94
AFFX-THR		8.3	A	5.9	A	7.8	A	7.33	0.93
AFFX-TRP		12.5	A	8.3	A	33.9	A	18.23	2.71
AFFX-R2-EC-BIOB	1703.3	P	1739.2	P	1361.9	P	1601.47	0.80
AFFX-R2-EC-BIOC	3859.0	P	 	 	4125.7	P	3992.36	1.07
AFFX-R2-EC-BIOD	15342.6	P	 	 	21500.1	P	18421.34	1.40
AFFX-R2-P1-CRE	43057.6	P	 	 	53284.4	P	48170.96	1.24
AFFX-R2-BS-DAP	7.0	A	3.3	A	4.0	A	4.77	0.57
AFFX-R2-BS-LYS	32.0	A	2.3	A	52.5	A	28.97	1.64
AFFX-R2-BS-PHE	52.0	A	7.1	A	11.4	A	23.51	0.22
AFFX-R2-BS-THR	86.7	A	27.4	A	77.3	A	63.79	0.89
______________________________________________________________________

