Report Type: Expression Report Date: 12:50PM 05/16/2007 ______________________________________________________________________ Filename: Soybean EM SeedCoatAleurone2.CHP Probe Array Type: Soybean Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 1.770 Scale Factor (SF): 5.397 TGT Value: 500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 57.81 Std: 0.52 Min: 55.90 Max: 59.50 Noise: Avg: 2.70 Std: 0.06 Min: 2.60 Max: 2.90 Corner+ Avg: 603 Count: 32 Corner- Avg: 18623 Count: 32 Central- Avg: 18248 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 61078 Number Present: 19410 31.8% Number Absent: 40967 67.1% Number Marginal: 701 1.1% Average Signal (P): 2674.0 Average Signal (A): 47.7 Average Signal (M): 171.3 Average Signal (All): 883.7 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BIOB 1040.3 P 1817.6 P 1166.0 P 1341.29 1.12 AFFX-BIOC 3845.3 P 2644.8 P 3245.05 0.69 AFFX-BIOD 6741.5 P 13828.7 P 10285.11 2.05 AFFX-CRE 41442.9 P 44075.3 P 42759.08 1.06 AFFX-DAP 38.7 A 46.8 A 8.1 A 31.21 0.21 AFFX-LYS 5.0 A 5.3 A 3.7 A 4.70 0.74 AFFX-PHE 6.9 A 14.8 A 16.7 A 12.80 2.44 AFFX-THR 7.6 A 25.9 A 46.6 A 26.70 6.17 AFFX-TRP 10.3 A 4.1 A 41.1 A 18.50 3.98 AFFX-R2-EC-BIOB 2188.4 P 2110.1 P 1463.8 P 1920.79 0.67 AFFX-R2-EC-BIOC 4632.6 P 4821.9 P 4727.24 1.04 AFFX-R2-EC-BIOD 18935.2 P 24742.9 P 21839.09 1.31 AFFX-R2-P1-CRE 50052.0 P 56543.5 P 53297.75 1.13 AFFX-R2-BS-DAP 11.0 A 11.4 A 6.5 A 9.65 0.59 AFFX-R2-BS-LYS 2.7 A 8.4 A 69.1 A 26.72 25.66 AFFX-R2-BS-PHE 47.0 A 4.1 A 98.4 A 49.84 2.09 AFFX-R2-BS-THR 3.6 A 11.2 A 26.0 A 13.60 7.24 ______________________________________________________________________