Report Type: Expression Report Date: 12:49PM 05/16/2007 ______________________________________________________________________ Filename: Soybean EM AxisShootMeristem1.CHP Probe Array Type: Soybean Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 1.330 Scale Factor (SF): 11.499 TGT Value: 500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 44.12 Std: 0.59 Min: 42.90 Max: 45.90 Noise: Avg: 1.92 Std: 0.04 Min: 1.80 Max: 2.00 Corner+ Avg: 458 Count: 32 Corner- Avg: 14111 Count: 32 Central- Avg: 13781 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 61078 Number Present: 16911 27.7% Number Absent: 43438 71.1% Number Marginal: 729 1.2% Average Signal (P): 3144.9 Average Signal (A): 71.5 Average Signal (M): 281.5 Average Signal (All): 924.9 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BIOB 2646.4 P 4049.8 P 2663.8 P 3119.99 1.01 AFFX-BIOC 8234.0 P 7376.4 P 7805.20 0.90 AFFX-BIOD 13649.2 P 26588.2 P 20118.71 1.95 AFFX-CRE 71526.3 P 80694.1 P 76110.19 1.13 AFFX-DAP 64.3 A 79.6 A 9.6 A 51.20 0.15 AFFX-LYS 7.7 A 21.2 A 3.5 A 10.81 0.46 AFFX-PHE 16.9 A 11.8 A 25.0 A 17.93 1.47 AFFX-THR 5.9 A 34.9 A 11.5 A 17.44 1.95 AFFX-TRP 20.2 A 4.5 A 65.6 A 30.11 3.25 AFFX-R2-EC-BIOB 4177.0 P 4156.7 P 3246.6 P 3860.09 0.78 AFFX-R2-EC-BIOC 11106.1 P 10945.5 P 11025.79 0.99 AFFX-R2-EC-BIOD 35657.1 P 50867.3 P 43262.16 1.43 AFFX-R2-P1-CRE 84109.3 P 104295.4 P 94202.39 1.24 AFFX-R2-BS-DAP 6.0 A 8.9 A 29.0 A 14.62 4.87 AFFX-R2-BS-LYS 12.8 A 4.3 A 79.8 A 32.28 6.25 AFFX-R2-BS-PHE 2.4 A 19.3 A 84.0 A 35.21 35.58 AFFX-R2-BS-THR 9.0 A 49.0 A 15.5 A 24.52 1.72 ______________________________________________________________________