Report Type: Expression Report Date: 12:50PM 05/16/2007 ______________________________________________________________________ Filename: Soybean EM AxisShootMeristem2.CHP Probe Array Type: Soybean Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 1.550 Scale Factor (SF): 9.056 TGT Value: 500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 54.06 Std: 0.76 Min: 51.70 Max: 55.80 Noise: Avg: 2.60 Std: 0.44 Min: 2.20 Max: 5.30 Corner+ Avg: 432 Count: 32 Corner- Avg: 14568 Count: 32 Central- Avg: 14598 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 61078 Number Present: 17567 28.8% Number Absent: 42788 70.1% Number Marginal: 723 1.2% Average Signal (P): 2956.4 Average Signal (A): 72.2 Average Signal (M): 254.5 Average Signal (All): 903.9 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BIOB 2105.7 P 2776.7 P 1811.1 P 2231.16 0.86 AFFX-BIOC 6263.9 P 4964.2 P 5614.06 0.79 AFFX-BIOD 10812.0 P 19841.4 P 15326.67 1.84 AFFX-CRE 57592.5 P 59810.0 P 58701.25 1.04 AFFX-DAP 111.4 A 98.4 A 9.1 A 72.96 0.08 AFFX-LYS 23.6 A 16.3 A 4.4 A 14.77 0.19 AFFX-PHE 11.1 A 7.5 A 32.5 A 17.03 2.94 AFFX-THR 7.4 A 24.3 A 20.5 A 17.41 2.77 AFFX-TRP 75.2 A 79.7 A 39.9 A 64.95 0.53 AFFX-R2-EC-BIOB 3722.6 P 3232.0 P 2513.3 P 3155.97 0.68 AFFX-R2-EC-BIOC 8309.1 P 8697.3 P 8503.21 1.05 AFFX-R2-EC-BIOD 27743.4 P 40632.1 P 34187.76 1.46 AFFX-R2-P1-CRE 65691.4 P 84881.4 P 75286.38 1.29 AFFX-R2-BS-DAP 46.1 A 5.9 A 6.9 A 19.64 0.15 AFFX-R2-BS-LYS 50.8 A 2.2 A 163.0 P 71.96 3.21 AFFX-R2-BS-PHE 71.4 A 12.9 A 155.3 A 79.84 2.18 AFFX-R2-BS-THR 121.7 A 29.9 A 76.2 A 75.91 0.63 ______________________________________________________________________