Report Type: Expression Report Date: 10:01PM 05/17/2007 ______________________________________________________________________ Filename: Soybean EM-Axis-RootMeristem1.CHP Probe Array Type: Soybean Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 1.660 Scale Factor (SF): 5.245 TGT Value: 500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 51.83 Std: 0.76 Min: 50.30 Max: 54.30 Noise: Avg: 2.69 Std: 0.07 Min: 2.50 Max: 2.90 Corner+ Avg: 615 Count: 32 Corner- Avg: 20244 Count: 32 Central- Avg: 20295 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 61078 Number Present: 19419 31.8% Number Absent: 40824 66.8% Number Marginal: 835 1.4% Average Signal (P): 2747.2 Average Signal (A): 55.1 Average Signal (M): 185.0 Average Signal (All): 912.8 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BIOB 1514.1 P 2388.3 P 1786.9 P 1896.44 1.18 AFFX-BIOC 4672.5 P 4254.3 P 4463.38 0.91 AFFX-BIOD 8646.3 P 16241.2 P 12443.77 1.88 AFFX-CRE 45484.0 P 48960.3 P 47222.13 1.08 AFFX-DAP 64.0 P 67.9 A 5.4 A 45.77 0.08 AFFX-LYS 27.3 A 33.3 A 6.7 A 22.42 0.25 AFFX-PHE 14.6 A 3.3 A 57.0 A 24.97 3.89 AFFX-THR 8.5 A 8.3 A 7.8 A 8.22 0.92 AFFX-TRP 11.1 A 66.1 A 12.9 A 30.01 1.17 AFFX-R2-EC-BIOB 3044.4 P 2919.2 P 2105.4 P 2689.64 0.69 AFFX-R2-EC-BIOC 6500.0 P 6225.7 P 6362.86 0.96 AFFX-R2-EC-BIOD 21765.3 P 31281.4 P 26523.36 1.44 AFFX-R2-P1-CRE 52866.0 P 67090.0 P 59978.00 1.27 AFFX-R2-BS-DAP 6.0 A 4.5 A 6.7 A 5.75 1.12 AFFX-R2-BS-LYS 5.4 A 3.5 A 33.2 A 14.05 6.16 AFFX-R2-BS-PHE 15.6 A 33.0 A 48.8 A 32.47 3.12 AFFX-R2-BS-THR 13.3 A 10.1 A 18.7 A 14.02 1.41 ______________________________________________________________________