Report Type: Expression Report Date: 10:02PM 05/17/2007 ______________________________________________________________________ Filename: Soybean EM-Axis-RootMeristem2.CHP Probe Array Type: Soybean Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 1.620 Scale Factor (SF): 8.661 TGT Value: 500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 52.78 Std: 0.43 Min: 51.10 Max: 53.60 Noise: Avg: 2.43 Std: 0.07 Min: 2.30 Max: 2.70 Corner+ Avg: 507 Count: 32 Corner- Avg: 17122 Count: 32 Central- Avg: 17237 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 61078 Number Present: 17857 29.2% Number Absent: 42448 69.5% Number Marginal: 773 1.3% Average Signal (P): 3166.5 Average Signal (A): 70.8 Average Signal (M): 259.5 Average Signal (All): 978.2 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BIOB 1692.6 P 3220.5 P 2336.0 P 2416.36 1.38 AFFX-BIOC 6409.2 P 5180.4 P 5794.83 0.81 AFFX-BIOD 11499.4 P 21900.2 P 16699.81 1.90 AFFX-CRE 68690.1 P 71373.4 P 70031.78 1.04 AFFX-DAP 10.4 A 95.3 A 6.4 A 37.36 0.61 AFFX-LYS 14.2 A 30.4 A 4.6 A 16.40 0.32 AFFX-PHE 5.0 A 42.3 A 21.3 A 22.88 4.29 AFFX-THR 4.5 A 33.1 A 41.4 A 26.35 9.17 AFFX-TRP 20.1 A 3.4 A 66.9 A 30.14 3.33 AFFX-R2-EC-BIOB 3584.6 P 3565.8 P 3232.7 P 3461.08 0.90 AFFX-R2-EC-BIOC 8089.3 P 8267.0 P 8178.13 1.02 AFFX-R2-EC-BIOD 29254.4 P 45729.4 P 37491.89 1.56 AFFX-R2-P1-CRE 75653.2 P 93168.1 P 84410.69 1.23 AFFX-R2-BS-DAP 12.3 A 3.8 A 19.3 A 11.80 1.57 AFFX-R2-BS-LYS 22.3 A 10.1 A 23.3 A 18.57 1.04 AFFX-R2-BS-PHE 22.0 A 28.9 A 112.2 A 54.35 5.10 AFFX-R2-BS-THR 10.5 A 8.0 A 6.8 A 8.43 0.65 ______________________________________________________________________