Report Type: Expression Report Date: 10:00PM 05/17/2007 ______________________________________________________________________ Filename: Soybean EM-Axis-Epidermis1.CHP Probe Array Type: Soybean Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 1.550 Scale Factor (SF): 15.862 TGT Value: 500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 49.48 Std: 1.01 Min: 46.80 Max: 52.20 Noise: Avg: 2.14 Std: 0.09 Min: 2.00 Max: 2.40 Corner+ Avg: 460 Count: 32 Corner- Avg: 13731 Count: 32 Central- Avg: 16166 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 61078 Number Present: 15382 25.2% Number Absent: 44953 73.6% Number Marginal: 743 1.2% Average Signal (P): 3936.7 Average Signal (A): 89.2 Average Signal (M): 367.5 Average Signal (All): 1061.5 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BIOB 4844.7 P 7576.1 P 5969.7 P 6130.18 1.23 AFFX-BIOC 15927.4 P 12273.9 P 14100.66 0.77 AFFX-BIOD 23974.1 P 48486.6 P 36230.32 2.02 AFFX-CRE 132072.1 P 149484.1 P 140778.13 1.13 AFFX-DAP 114.0 A 175.7 A 6.5 A 98.71 0.06 AFFX-LYS 13.0 A 50.2 A 8.0 A 23.71 0.62 AFFX-PHE 12.0 A 19.4 A 38.4 A 23.25 3.19 AFFX-THR 33.3 A 26.8 A 78.3 A 46.15 2.35 AFFX-TRP 24.8 A 18.7 A 91.4 A 44.95 3.69 AFFX-R2-EC-BIOB 8568.2 P 7552.5 P 7449.0 P 7856.55 0.87 AFFX-R2-EC-BIOC 20268.8 P 19491.5 P 19880.13 0.96 AFFX-R2-EC-BIOD 65351.7 P 96687.6 P 81019.66 1.48 AFFX-R2-P1-CRE 150276.1 P 184045.2 P 167160.66 1.22 AFFX-R2-BS-DAP 11.9 A 4.5 A 108.3 A 41.56 9.12 AFFX-R2-BS-LYS 43.5 A 4.2 A 163.0 P 70.25 3.74 AFFX-R2-BS-PHE 118.5 A 13.2 A 10.1 A 47.24 0.09 AFFX-R2-BS-THR 32.8 A 14.2 A 189.3 A 78.81 5.76 ______________________________________________________________________