Report Type: Expression Report Date: 10:00PM 05/17/2007 ______________________________________________________________________ Filename: Soybean EM-Axis-Epidermis2.CHP Probe Array Type: Soybean Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 1.450 Scale Factor (SF): 17.085 TGT Value: 500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 46.43 Std: 0.45 Min: 44.30 Max: 47.10 Noise: Avg: 1.97 Std: 0.06 Min: 1.90 Max: 2.20 Corner+ Avg: 490 Count: 32 Corner- Avg: 14931 Count: 32 Central- Avg: 15054 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 61078 Number Present: 15594 25.5% Number Absent: 44788 73.3% Number Marginal: 696 1.1% Average Signal (P): 3821.0 Average Signal (A): 89.7 Average Signal (M): 371.8 Average Signal (All): 1045.6 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BIOB 4498.9 P 7250.7 P 5392.8 P 5714.12 1.20 AFFX-BIOC 15972.1 P 12789.9 P 14380.99 0.80 AFFX-BIOD 25722.9 P 47162.5 P 36442.70 1.83 AFFX-CRE 130171.4 P 136809.6 P 133490.53 1.05 AFFX-DAP 91.6 A 115.1 A 5.9 A 70.89 0.06 AFFX-LYS 55.9 A 60.4 A 12.7 A 43.01 0.23 AFFX-PHE 9.0 A 10.4 A 19.4 A 12.90 2.16 AFFX-THR 6.1 A 12.7 A 61.1 A 26.63 10.04 AFFX-TRP 38.6 A 22.1 A 20.4 A 27.02 0.53 AFFX-R2-EC-BIOB 8457.0 P 7768.3 P 6959.1 P 7728.12 0.82 AFFX-R2-EC-BIOC 20431.5 P 18670.6 P 19551.05 0.91 AFFX-R2-EC-BIOD 63953.6 P 88772.0 P 76362.84 1.39 AFFX-R2-P1-CRE 148565.0 P 181907.1 P 165236.03 1.22 AFFX-R2-BS-DAP 26.0 A 19.7 A 6.2 A 17.30 0.24 AFFX-R2-BS-LYS 4.2 A 18.1 A 233.8 P 85.39 55.55 AFFX-R2-BS-PHE 5.4 A 7.1 A 20.2 A 10.88 3.76 AFFX-R2-BS-THR 60.0 A 246.6 A 44.4 A 117.02 0.74 ______________________________________________________________________