Report Type: Expression Report Date: 10:01PM 05/17/2007 ______________________________________________________________________ Filename: Soybean EM-Axis-Parenchyma2.CHP Probe Array Type: Soybean Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 1.500 Scale Factor (SF): 11.681 TGT Value: 500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 50.81 Std: 0.53 Min: 48.90 Max: 52.00 Noise: Avg: 2.03 Std: 0.05 Min: 1.90 Max: 2.20 Corner+ Avg: 411 Count: 32 Corner- Avg: 11034 Count: 32 Central- Avg: 12441 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 61078 Number Present: 17072 28.0% Number Absent: 43236 70.8% Number Marginal: 770 1.3% Average Signal (P): 3324.0 Average Signal (A): 77.5 Average Signal (M): 280.1 Average Signal (All): 987.5 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BIOB 2239.3 P 2999.1 P 2254.0 P 2497.46 1.01 AFFX-BIOC 6297.1 P 5572.5 P 5934.83 0.88 AFFX-BIOD 10851.3 P 19030.1 P 14940.67 1.75 AFFX-CRE 62940.1 P 73023.4 P 67981.74 1.16 AFFX-DAP 60.6 A 93.3 A 7.1 A 53.64 0.12 AFFX-LYS 8.6 A 83.9 A 31.3 A 41.26 3.63 AFFX-PHE 9.5 A 7.8 A 13.9 A 10.40 1.47 AFFX-THR 12.4 A 24.8 A 18.5 A 18.56 1.49 AFFX-TRP 21.6 A 70.1 A 123.7 M 71.79 5.71 AFFX-R2-EC-BIOB 3384.6 P 3893.7 P 2818.3 P 3365.54 0.83 AFFX-R2-EC-BIOC 7824.3 P 7773.2 P 7798.79 0.99 AFFX-R2-EC-BIOD 29588.6 P 40718.2 P 35153.38 1.38 AFFX-R2-P1-CRE 72956.3 P 95625.9 P 84291.12 1.31 AFFX-R2-BS-DAP 18.1 A 13.9 A 58.0 A 29.99 3.20 AFFX-R2-BS-LYS 12.3 A 94.4 A 173.5 A 93.39 14.15 AFFX-R2-BS-PHE 9.8 A 6.2 A 93.4 A 36.44 9.54 AFFX-R2-BS-THR 51.8 A 82.0 A 17.9 A 50.56 0.35 ______________________________________________________________________