Report Type: Expression Report Date: 10:03PM 05/17/2007 ______________________________________________________________________ Filename: Soybean EM-Coty-Vascular1.CHP Probe Array Type: Soybean Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 1.870 Scale Factor (SF): 4.670 TGT Value: 500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 61.08 Std: 0.93 Min: 57.60 Max: 62.90 Noise: Avg: 2.97 Std: 0.07 Min: 2.80 Max: 3.20 Corner+ Avg: 563 Count: 32 Corner- Avg: 18118 Count: 32 Central- Avg: 17529 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 61078 Number Present: 20070 32.9% Number Absent: 40267 65.9% Number Marginal: 741 1.2% Average Signal (P): 2545.0 Average Signal (A): 48.0 Average Signal (M): 170.1 Average Signal (All): 870.0 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BIOB 865.7 P 1622.2 P 901.6 P 1129.81 1.04 AFFX-BIOC 3070.9 P 2765.1 P 2917.99 0.90 AFFX-BIOD 6162.5 P 11120.2 P 8641.33 1.80 AFFX-CRE 34350.4 P 40950.4 P 37650.41 1.19 AFFX-DAP 8.6 A 105.4 A 5.9 A 39.96 0.69 AFFX-LYS 46.9 A 52.0 A 13.1 A 37.33 0.28 AFFX-PHE 32.4 A 5.9 A 9.1 A 15.80 0.28 AFFX-THR 26.0 A 2.0 A 9.5 A 12.49 0.37 AFFX-TRP 47.7 A 8.5 A 4.8 A 20.34 0.10 AFFX-R2-EC-BIOB 1742.0 P 1694.3 P 1300.4 P 1578.88 0.75 AFFX-R2-EC-BIOC 3830.4 P 4325.1 P 4077.73 1.13 AFFX-R2-EC-BIOD 15772.5 P 20398.2 P 18085.31 1.29 AFFX-R2-P1-CRE 41346.1 P 50851.3 P 46098.72 1.23 AFFX-R2-BS-DAP 14.7 A 2.0 A 4.2 A 6.98 0.29 AFFX-R2-BS-LYS 23.3 A 3.1 A 58.4 P 28.27 2.51 AFFX-R2-BS-PHE 79.4 A 17.0 A 66.5 A 54.29 0.84 AFFX-R2-BS-THR 52.3 A 9.5 A 27.0 A 29.61 0.52 ______________________________________________________________________