Report Type:	Expression Report
Date:          	10:03PM 05/17/2007
______________________________________________________________________

Filename:		Soybean EM-Coty-Vascular2.CHP
Probe Array Type:	Soybean
Algorithm:		Statistical
Probe Pair Thr:	8
Controls:		Antisense
______________________________________________________________________

Alpha1:		0.05
Alpha2:		0.065
Tau:		0.015
Noise (RawQ):	1.980
Scale Factor (SF):	3.888
TGT Value:		500
Norm Factor (NF):	1.000
______________________________________________________________________

Background:
	Avg: 65.31	Std: 1.01	Min: 61.90	Max: 67.60
Noise:
	Avg: 3.25	Std: 0.09	Min: 3.00	Max: 3.40
Corner+
	Avg: 593		Count: 32
Corner-
	Avg: 18123		Count: 32
Central-
	Avg: 17360		Count: 9
______________________________________________________________________

The following data represents probe sets that exceed the probe pair threshold 
and are not called "No Call".

Total Probe Sets:	61078
Number Present:	20679	33.9%
Number Absent:	39630	64.9%
Number Marginal:	769	1.3%

Average Signal (P):	2323.5
Average Signal (A):	45.7
Average Signal (M):	170.7
Average Signal (All):	818.5
______________________________________________________________________

Spike Controls:
Probe Set		Sig(5')	Det(5')	Sig(M')	Det(M')	Sig(3')	Det(3')	Sig(all)	Sig(3'/5')
AFFX-BIOB		713.4	P	1200.0	P	805.1	P	906.17	1.13
AFFX-BIOC		2336.5	P	 	 	2246.8	P	2291.65	0.96
AFFX-BIOD		4721.3	P	 	 	9189.5	P	6955.42	1.95
AFFX-CRE		27652.4	P	 	 	32293.1	P	29972.75	1.17
AFFX-DAP		54.7	A	87.6	A	4.8	A	49.02	0.09
AFFX-LYS		24.4	A	14.1	A	2.4	A	13.63	0.10
AFFX-PHE		8.9	A	4.4	A	5.9	A	6.38	0.67
AFFX-THR		13.2	A	41.2	A	30.3	A	28.25	2.29
AFFX-TRP		23.0	A	8.9	A	5.1	A	12.34	0.22
AFFX-R2-EC-BIOB	1398.9	P	1440.9	P	1099.4	P	1313.07	0.79
AFFX-R2-EC-BIOC	2973.7	P	 	 	3710.0	P	3341.89	1.25
AFFX-R2-EC-BIOD	12696.8	P	 	 	17034.2	P	14865.53	1.34
AFFX-R2-P1-CRE	33340.8	P	 	 	41255.9	P	37298.37	1.24
AFFX-R2-BS-DAP	4.4	A	38.2	A	1.1	A	14.56	0.25
AFFX-R2-BS-LYS	0.9	A	1.4	A	58.5	P	20.27	65.62
AFFX-R2-BS-PHE	42.7	A	49.3	A	8.6	A	33.52	0.20
AFFX-R2-BS-THR	11.9	A	9.5	A	33.7	A	18.36	2.84
______________________________________________________________________

