Report Type: Expression Report Date: 02:39PM 05/24/2007 ______________________________________________________________________ Filename: Soybean EM-Coty-AB Epidermis1.CHP Probe Array Type: Soybean Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 2.040 Scale Factor (SF): 3.911 TGT Value: 500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 63.76 Std: 1.23 Min: 59.80 Max: 66.30 Noise: Avg: 3.46 Std: 0.13 Min: 3.20 Max: 4.00 Corner+ Avg: 607 Count: 32 Corner- Avg: 21225 Count: 32 Central- Avg: 21617 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 61078 Number Present: 20044 32.8% Number Absent: 40259 65.9% Number Marginal: 775 1.3% Average Signal (P): 2517.5 Average Signal (A): 51.1 Average Signal (M): 181.6 Average Signal (All): 862.2 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BIOB 920.3 P 1361.9 P 1059.1 P 1113.78 1.15 AFFX-BIOC 3046.3 P 2795.4 P 2920.86 0.92 AFFX-BIOD 5159.6 P 11256.2 P 8207.92 2.18 AFFX-CRE 33106.5 P 33205.4 P 33155.97 1.00 AFFX-DAP 59.5 A 86.0 A 6.2 A 50.54 0.10 AFFX-LYS 21.4 A 13.2 A 7.4 A 13.99 0.34 AFFX-PHE 11.7 A 5.3 A 21.1 A 12.71 1.81 AFFX-THR 3.7 A 12.2 A 35.2 A 17.06 9.43 AFFX-TRP 20.6 A 9.9 A 34.0 A 21.53 1.65 AFFX-R2-EC-BIOB 1512.7 P 1684.0 P 1294.2 P 1496.98 0.86 AFFX-R2-EC-BIOC 3719.1 P 4167.0 P 3943.03 1.12 AFFX-R2-EC-BIOD 14826.3 P 19616.1 P 17221.21 1.32 AFFX-R2-P1-CRE 39123.5 P 48610.8 P 43867.13 1.24 AFFX-R2-BS-DAP 4.4 A 4.7 A 1.4 A 3.50 0.31 AFFX-R2-BS-LYS 6.9 A 4.6 A 81.0 P 30.84 11.74 AFFX-R2-BS-PHE 68.5 A 7.8 A 62.0 A 46.11 0.91 AFFX-R2-BS-THR 3.4 A 102.3 A 11.4 A 39.02 3.39 ______________________________________________________________________