Report Type: Expression Report Date: 02:41PM 05/24/2007 ______________________________________________________________________ Filename: Soybean EM-Coty-AB Epidermis2.CHP Probe Array Type: Soybean Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 2.310 Scale Factor (SF): 5.497 TGT Value: 500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 75.95 Std: 1.32 Min: 73.50 Max: 81.30 Noise: Avg: 3.81 Std: 0.16 Min: 3.40 Max: 4.20 Corner+ Avg: 585 Count: 32 Corner- Avg: 19566 Count: 32 Central- Avg: 20503 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 61078 Number Present: 18133 29.7% Number Absent: 42179 69.1% Number Marginal: 766 1.3% Average Signal (P): 2901.1 Average Signal (A): 70.6 Average Signal (M): 237.5 Average Signal (All): 913.0 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BIOB 1230.6 P 2051.5 P 1276.2 P 1519.44 1.04 AFFX-BIOC 4205.1 P 3581.7 P 3893.38 0.85 AFFX-BIOD 7312.4 P 16857.9 P 12085.17 2.31 AFFX-CRE 43178.3 P 45782.2 P 44480.27 1.06 AFFX-DAP 55.5 A 59.7 A 5.8 A 40.34 0.10 AFFX-LYS 8.4 A 20.2 A 26.5 A 18.36 3.17 AFFX-PHE 6.0 A 11.7 A 28.8 A 15.50 4.77 AFFX-THR 6.1 A 25.9 A 13.9 A 15.31 2.28 AFFX-TRP 24.3 A 34.3 A 13.0 A 23.85 0.53 AFFX-R2-EC-BIOB 2329.8 P 2475.1 P 1864.0 P 2222.97 0.80 AFFX-R2-EC-BIOC 5599.0 P 6193.4 P 5896.17 1.11 AFFX-R2-EC-BIOD 22515.2 P 30500.0 P 26507.58 1.35 AFFX-R2-P1-CRE 50663.3 P 65676.1 P 58169.69 1.30 AFFX-R2-BS-DAP 5.4 A 8.0 A 3.7 A 5.70 0.69 AFFX-R2-BS-LYS 41.9 A 30.5 A 96.3 P 56.26 2.30 AFFX-R2-BS-PHE 40.1 A 10.6 A 26.7 A 25.78 0.67 AFFX-R2-BS-THR 20.2 A 149.6 A 79.2 A 83.02 3.91 ______________________________________________________________________