Report Type: Expression Report Date: 10:03PM 05/17/2007 ______________________________________________________________________ Filename: Soybean EM-Coty-AB Parenchyma2.CHP Probe Array Type: Soybean Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 1.890 Scale Factor (SF): 4.706 TGT Value: 500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 63.12 Std: 0.90 Min: 59.70 Max: 65.00 Noise: Avg: 3.03 Std: 0.11 Min: 2.80 Max: 3.30 Corner+ Avg: 462 Count: 32 Corner- Avg: 14932 Count: 32 Central- Avg: 15561 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 61078 Number Present: 19456 31.9% Number Absent: 40851 66.9% Number Marginal: 771 1.3% Average Signal (P): 2679.9 Average Signal (A): 52.9 Average Signal (M): 181.2 Average Signal (All): 891.3 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BIOB 766.6 P 1259.6 P 833.3 P 953.16 1.09 AFFX-BIOC 2688.8 P 2867.3 P 2778.03 1.07 AFFX-BIOD 5597.8 P 10267.7 P 7932.75 1.83 AFFX-CRE 30772.5 P 35377.5 P 33075.03 1.15 AFFX-DAP 30.1 A 28.9 A 6.3 A 21.78 0.21 AFFX-LYS 3.1 A 7.2 A 5.3 A 5.22 1.72 AFFX-PHE 3.4 A 6.9 A 23.9 A 11.40 7.10 AFFX-THR 5.4 A 7.0 A 55.6 A 22.69 10.35 AFFX-TRP 27.7 A 9.1 A 33.8 M 23.55 1.22 AFFX-R2-EC-BIOB 1429.0 P 1697.2 P 1308.0 P 1478.05 0.92 AFFX-R2-EC-BIOC 3508.3 P 3991.0 P 3749.66 1.14 AFFX-R2-EC-BIOD 13858.8 P 17974.1 P 15916.44 1.30 AFFX-R2-P1-CRE 37854.9 P 46174.7 P 42014.84 1.22 AFFX-R2-BS-DAP 7.1 A 3.7 A 4.3 A 5.00 0.61 AFFX-R2-BS-LYS 44.7 A 24.9 A 72.8 A 47.46 1.63 AFFX-R2-BS-PHE 5.1 A 3.6 A 36.3 A 15.02 7.12 AFFX-R2-BS-THR 13.9 A 4.7 A 84.3 A 34.31 6.07 ______________________________________________________________________