Report Type: Expression Report Date: 10:03PM 05/17/2007 ______________________________________________________________________ Filename: Soybean EM-Coty-AD Epidermis1.CHP Probe Array Type: Soybean Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 1.670 Scale Factor (SF): 7.546 TGT Value: 500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 56.57 Std: 0.96 Min: 52.50 Max: 58.70 Noise: Avg: 2.47 Std: 0.06 Min: 2.30 Max: 2.60 Corner+ Avg: 413 Count: 32 Corner- Avg: 12764 Count: 32 Central- Avg: 12729 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 61078 Number Present: 18132 29.7% Number Absent: 42215 69.1% Number Marginal: 731 1.2% Average Signal (P): 2937.6 Average Signal (A): 61.4 Average Signal (M): 218.6 Average Signal (All): 917.1 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BIOB 926.0 P 1712.0 P 1023.0 P 1220.35 1.10 AFFX-BIOC 3341.7 P 2862.8 P 3102.27 0.86 AFFX-BIOD 6559.1 P 12977.3 P 9768.17 1.98 AFFX-CRE 39109.9 P 43975.3 P 41542.62 1.12 AFFX-DAP 11.5 A 76.9 A 4.2 A 30.85 0.36 AFFX-LYS 7.5 A 12.7 A 3.2 A 7.79 0.44 AFFX-PHE 15.6 A 9.9 A 8.2 A 11.23 0.53 AFFX-THR 8.0 A 55.8 A 8.6 A 24.11 1.07 AFFX-TRP 15.6 A 17.8 A 9.5 A 14.31 0.61 AFFX-R2-EC-BIOB 1713.2 P 1995.9 P 1288.6 P 1665.92 0.75 AFFX-R2-EC-BIOC 4131.0 P 5096.0 P 4613.48 1.23 AFFX-R2-EC-BIOD 17879.8 P 23458.8 P 20669.26 1.31 AFFX-R2-P1-CRE 48887.3 P 56135.8 P 52511.59 1.15 AFFX-R2-BS-DAP 18.0 A 8.7 A 34.7 A 20.48 1.93 AFFX-R2-BS-LYS 62.9 A 2.1 A 105.2 P 56.72 1.67 AFFX-R2-BS-PHE 71.8 A 10.5 A 60.0 A 47.45 0.84 AFFX-R2-BS-THR 14.3 A 16.7 A 20.1 A 17.02 1.41 ______________________________________________________________________