Report Type: Expression Report Date: 10:03PM 05/17/2007 ______________________________________________________________________ Filename: Soybean EM-Coty-AD Epidermis2.CHP Probe Array Type: Soybean Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 1.500 Scale Factor (SF): 9.881 TGT Value: 500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 49.19 Std: 0.32 Min: 48.20 Max: 50.20 Noise: Avg: 2.19 Std: 0.06 Min: 2.00 Max: 2.40 Corner+ Avg: 452 Count: 32 Corner- Avg: 13829 Count: 32 Central- Avg: 14786 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 61078 Number Present: 16944 27.7% Number Absent: 43206 70.7% Number Marginal: 928 1.5% Average Signal (P): 3329.9 Average Signal (A): 80.8 Average Signal (M): 301.7 Average Signal (All): 985.5 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BIOB 2091.2 P 3389.3 P 2090.7 P 2523.71 1.00 AFFX-BIOC 6312.3 P 5730.3 P 6021.33 0.91 AFFX-BIOD 11183.9 P 23061.8 P 17122.85 2.06 AFFX-CRE 62869.5 P 67642.3 P 65255.90 1.08 AFFX-DAP 46.9 A 65.8 A 9.3 A 40.70 0.20 AFFX-LYS 12.9 A 11.6 A 4.1 A 9.55 0.32 AFFX-PHE 9.0 A 12.5 A 27.4 A 16.31 3.05 AFFX-THR 21.3 A 43.5 A 48.8 A 37.83 2.29 AFFX-TRP 13.3 A 11.1 A 4.7 A 9.67 0.35 AFFX-R2-EC-BIOB 3346.5 P 3453.9 P 2850.9 P 3217.12 0.85 AFFX-R2-EC-BIOC 8210.1 P 9205.4 P 8707.74 1.12 AFFX-R2-EC-BIOD 30052.6 P 38757.9 P 34405.23 1.29 AFFX-R2-P1-CRE 74337.2 P 94345.1 P 84341.17 1.27 AFFX-R2-BS-DAP 11.0 A 62.0 A 44.3 A 39.10 4.02 AFFX-R2-BS-LYS 38.3 A 4.2 A 108.3 P 50.26 2.83 AFFX-R2-BS-PHE 52.3 A 14.2 A 112.9 A 59.80 2.16 AFFX-R2-BS-THR 6.6 A 6.5 A 69.8 A 27.64 10.59 ______________________________________________________________________