Report Type: Expression Report Date: 01:13PM 08/17/2006 ______________________________________________________________________ Filename: Soybean Hilum 4.CHP Probe Array Type: Soybean Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 1.990 Scale Factor (SF): 8.927 TGT Value: 500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 63.99 Std: 1.21 Min: 61.20 Max: 66.30 Noise: Avg: 3.20 Std: 0.07 Min: 3.00 Max: 3.40 Corner+ Avg: 554 Count: 32 Corner- Avg: 19159 Count: 32 Central- Avg: 19423 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 61078 Number Present: 16955 27.8% Number Absent: 43342 71.0% Number Marginal: 781 1.3% Average Signal (P): 3313.7 Average Signal (A): 73.6 Average Signal (M): 258.3 Average Signal (All): 975.4 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BIOB 1919.7 P 3842.2 P 2550.4 P 2770.76 1.33 AFFX-BIOC 6633.7 P 4975.2 P 5804.47 0.75 AFFX-BIOD 12781.6 P 29555.2 P 21168.43 2.31 AFFX-CRE 70476.5 P 77261.7 P 73869.11 1.10 AFFX-DAP 55.7 A 20.5 A 11.7 A 29.29 0.21 AFFX-LYS 30.9 A 16.6 A 18.1 A 21.88 0.59 AFFX-PHE 18.1 A 13.0 A 11.5 A 14.20 0.64 AFFX-THR 7.1 A 36.6 A 106.4 A 50.04 15.00 AFFX-TRP 116.0 A 14.3 A 15.0 A 48.43 0.13 AFFX-R2-EC-BIOB 3292.2 P 3696.0 P 3156.3 P 3381.51 0.96 AFFX-R2-EC-BIOC 8025.1 P 7007.5 P 7516.31 0.87 AFFX-R2-EC-BIOD 37309.7 P 49676.4 P 43493.06 1.33 AFFX-R2-P1-CRE 84978.7 P 109281.3 P 97129.99 1.29 AFFX-R2-BS-DAP 9.4 A 52.0 A 2.2 A 21.20 0.24 AFFX-R2-BS-LYS 18.6 A 7.4 A 71.4 A 32.48 3.83 AFFX-R2-BS-PHE 98.9 A 61.9 A 99.4 A 86.70 1.01 AFFX-R2-BS-THR 9.7 A 52.9 A 68.6 A 43.76 7.06 ______________________________________________________________________