Report Type:	Expression Report
Date:          	01:43PM 10/12/2007
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Filename:		Arabidopsis GCE3.CHP
Probe Array Type:	ATH1-121501
Algorithm:		Statistical
Probe Pair Thr:	8
Controls:		Antisense
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Alpha1:		0.05
Alpha2:		0.065
Tau:		0.015
Noise (RawQ):	1.020
Scale Factor (SF):	19.823
TGT Value:		500
Norm Factor (NF):	1.000
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Background:
	Avg: 29.77	Std: 0.47	Min: 28.80	Max: 30.80
Noise:
	Avg: 0.88	Std: 0.03	Min: 0.80	Max: 1.00
Corner+
	Avg: 134		Count: 32
Corner-
	Avg: 10526		Count: 32
Central-
	Avg: 8086		Count: 9
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The following data represents probe sets that exceed the probe pair threshold 
and are not called "No Call".

Total Probe Sets:	22810
Number Present:	9828	43.1%
Number Absent:	12552	55.0%
Number Marginal:	430	1.9%

Average Signal (P):	1991.9
Average Signal (A):	58.6
Average Signal (M):	165.2
Average Signal (All):	893.6
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Housekeeping Controls:
Probe Set		Sig(5')	Det(5')	Sig(M')	Det(M')	Sig(3')	Det(3')	Sig(all)	Sig(3'/5')
AFFX-R2-AT-ACTIN	3859.0	P	360.0	P	2250.0	P	2156.31	0.58
AFFX-R2-AT-GAPDH	1778.9	P	 	 	2200.1	P	1989.52	1.24
AFFX-R2-AT-UBQ	4613.0	P	 	 	25481.0	P	15047.03	5.52
AFFX-ATHAL-ACTIN	219.8	P	122.1	A	1728.1	P	689.97	7.86
AFFX-ATHAL-GAPDH	551.4	P	1397.3	P	5933.0	P	2627.21	10.76
AFFX-ATHAL-UBQ	2486.7	P	6169.0	P	19389.7	P	9348.46	7.80
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Spike Controls:
Probe Set		Sig(5')	Det(5')	Sig(M')	Det(M')	Sig(3')	Det(3')	Sig(all)	Sig(3'/5')
AFFX-BIOB		8256.7	P	14511.6	P	11320.4	P	11362.91	1.37
AFFX-BIOC		27539.5	P	 	 	17300.5	P	22419.97	0.63
AFFX-BIOD		44188.0	P	 	 	73600.7	P	58894.33	1.67
AFFX-CRE		148381.7	P	 	 	224819.0	P	186600.38	1.52
AFFX-DAP		77.4	M	11.4	A	24.5	A	37.76	0.32
AFFX-LYS		13.7	A	9.6	A	9.4	A	10.89	0.69
AFFX-PHE		23.8	A	48.5	A	22.0	A	31.41	0.92
AFFX-THR		30.9	A	62.3	A	19.4	A	37.52	0.63
AFFX-TRP		46.5	A	13.5	A	14.9	A	24.99	0.32
AFFX-R2-EC-BIOB	11703.0	P	13971.4	P	11940.7	P	12538.36	1.02
AFFX-R2-EC-BIOC	35954.5	P	 	 	34765.6	P	35360.04	0.97
AFFX-R2-EC-BIOD	78686.3	P	 	 	96705.8	P	87696.03	1.23
AFFX-R2-P1-CRE	174663.9	P	 	 	197993.2	P	186328.56	1.13
AFFX-R2-BS-DAP	3.3	A	52.5	A	7.8	A	21.18	2.33
AFFX-R2-BS-LYS	30.8	A	2.2	A	8.6	A	13.88	0.28
AFFX-R2-BS-PHE	25.1	A	6.1	A	5.5	A	12.21	0.22
AFFX-R2-BS-THR	88.5	A	5.1	A	65.3	A	53.00	0.74
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