Report Type:	Expression Report
Date:          	01:44PM 10/12/2007
______________________________________________________________________

Filename:		Arabidopsis GPSc2.CHP
Probe Array Type:	ATH1-121501
Algorithm:		Statistical
Probe Pair Thr:	8
Controls:		Antisense
______________________________________________________________________

Alpha1:		0.05
Alpha2:		0.065
Tau:		0.015
Noise (RawQ):	0.950
Scale Factor (SF):	18.575
TGT Value:		500
Norm Factor (NF):	1.000
______________________________________________________________________

Background:
	Avg: 28.88	Std: 0.18	Min: 28.30	Max: 29.40
Noise:
	Avg: 0.86	Std: 0.04	Min: 0.80	Max: 1.00
Corner+
	Avg: 142		Count: 32
Corner-
	Avg: 10432		Count: 32
Central-
	Avg: 7991		Count: 9
______________________________________________________________________

The following data represents probe sets that exceed the probe pair threshold 
and are not called "No Call".

Total Probe Sets:	22810
Number Present:	11854	52.0%
Number Absent:	10619	46.6%
Number Marginal:	337	1.5%

Average Signal (P):	1444.1
Average Signal (A):	48.4
Average Signal (M):	168.4
Average Signal (All):	775.5
______________________________________________________________________

Housekeeping Controls:
Probe Set		Sig(5')	Det(5')	Sig(M')	Det(M')	Sig(3')	Det(3')	Sig(all)	Sig(3'/5')
AFFX-R2-AT-ACTIN	12750.9	P	1786.0	P	7947.7	P	7494.86	0.62
AFFX-R2-AT-GAPDH	5333.0	P	 	 	6520.2	P	5926.57	1.22
AFFX-R2-AT-UBQ	3929.7	P	 	 	13123.4	P	8526.54	3.34
AFFX-ATHAL-ACTIN	535.5	P	839.2	P	5260.6	P	2211.74	9.82
AFFX-ATHAL-GAPDH	1950.4	P	4139.7	P	15081.6	P	7057.22	7.73
AFFX-ATHAL-UBQ	2131.6	P	3579.0	P	12482.0	P	6064.20	5.86
______________________________________________________________________

Spike Controls:
Probe Set		Sig(5')	Det(5')	Sig(M')	Det(M')	Sig(3')	Det(3')	Sig(all)	Sig(3'/5')
AFFX-BIOB		7519.0	P	13902.9	P	10652.7	P	10691.53	1.42
AFFX-BIOC		24376.2	P	 	 	16338.8	P	20357.47	0.67
AFFX-BIOD		41037.6	P	 	 	70400.6	P	55719.10	1.72
AFFX-CRE		142613.1	P	 	 	216123.6	P	179368.38	1.52
AFFX-DAP		72.1	A	2.8	A	39.7	A	38.19	0.55
AFFX-LYS		26.1	A	51.0	A	36.5	A	37.85	1.40
AFFX-PHE		3.3	A	4.0	A	11.4	A	6.23	3.42
AFFX-THR		25.6	A	5.2	A	17.8	A	16.20	0.69
AFFX-TRP		89.6	A	3.9	A	56.1	A	49.86	0.63
AFFX-R2-EC-BIOB	10117.0	P	13357.4	P	11473.5	P	11649.31	1.13
AFFX-R2-EC-BIOC	34380.4	P	 	 	27126.0	P	30753.22	0.79
AFFX-R2-EC-BIOD	73197.2	P	 	 	83754.4	P	78475.80	1.14
AFFX-R2-P1-CRE	165010.6	P	 	 	173213.1	P	169111.88	1.05
AFFX-R2-BS-DAP	64.8	A	30.4	A	4.4	A	33.19	0.07
AFFX-R2-BS-LYS	19.7	A	6.7	A	22.1	A	16.15	1.12
AFFX-R2-BS-PHE	48.0	A	55.0	A	7.2	A	36.75	0.15
AFFX-R2-BS-THR	96.4	A	10.3	A	14.2	A	40.30	0.15
______________________________________________________________________

