Report Type:	Expression Report
Date:          	09:31AM 07/03/2006
______________________________________________________________________

Filename:		Soy Inner Integument 5.CHP
Probe Array Type:	Soybean
Algorithm:		Statistical
Probe Pair Thr:	8
Controls:		Antisense
______________________________________________________________________

Alpha1:		0.05
Alpha2:		0.065
Tau:		0.015
Noise (RawQ):	1.480
Scale Factor (SF):	20.578
TGT Value:		500
Norm Factor (NF):	1.000
______________________________________________________________________

Background:
	Avg: 45.81	Std: 0.34	Min: 44.90	Max: 47.00
Noise:
	Avg: 2.11	Std: 0.07	Min: 2.00	Max: 2.50
Corner+
	Avg: 720		Count: 32
Corner-
	Avg: 19856		Count: 32
Central-
	Avg: 19692		Count: 9
______________________________________________________________________

The following data represents probe sets that exceed the probe pair threshold 
and are not called "No Call".

Total Probe Sets:	61078
Number Present:	14663	24.0%
Number Absent:	45753	74.9%
Number Marginal:	662	1.1%

Average Signal (P):	3971.4
Average Signal (A):	99.2
Average Signal (M):	428.6
Average Signal (All):	1032.4
______________________________________________________________________

Spike Controls:
Probe Set		Sig(5')	Det(5')	Sig(M')	Det(M')	Sig(3')	Det(3')	Sig(all)	Sig(3'/5')
AFFX-BIOB		6836.3	P	12978.2	P	9980.7	P	9931.73	1.46
AFFX-BIOC		26129.0	P	 	 	19519.8	P	22824.43	0.75
AFFX-BIOD		38238.2	P	 	 	62788.5	P	50513.36	1.64
AFFX-CRE		157186.8	P	 	 	168066.5	P	162626.63	1.07
AFFX-DAP		161.7	A	110.9	A	19.4	A	97.36	0.12
AFFX-LYS		41.5	A	10.8	A	33.5	A	28.59	0.81
AFFX-PHE		11.7	A	14.5	A	54.9	A	27.05	4.68
AFFX-THR		24.3	A	33.2	A	9.1	A	22.20	0.37
AFFX-TRP		23.7	A	18.7	A	85.6	A	42.67	3.61
AFFX-R2-EC-BIOB	12788.1	P	12322.0	P	12736.6	P	12615.60	1.00
AFFX-R2-EC-BIOC	27204.7	P	 	 	24827.6	P	26016.15	0.91
AFFX-R2-EC-BIOD	92986.9	P	 	 	107083.5	P	100035.16	1.15
AFFX-R2-P1-CRE	182868.6	P	 	 	213838.9	P	198353.75	1.17
AFFX-R2-BS-DAP	36.8	A	123.3	A	6.2	A	55.43	0.17
AFFX-R2-BS-LYS	24.1	A	117.3	A	247.5	A	129.66	10.25
AFFX-R2-BS-PHE	145.1	P	85.7	A	17.8	A	82.89	0.12
AFFX-R2-BS-THR	32.2	A	32.8	A	18.9	A	27.98	0.59
______________________________________________________________________

