Report Type:	Expression Report
Date:          	05:17PM 02/14/2008
______________________________________________________________________

Filename:		Arabidopsis lcCE5.CHP
Probe Array Type:	ATH1-121501
Algorithm:		Statistical
Probe Pair Thr:	8
Controls:		Antisense
______________________________________________________________________

Alpha1:		0.05
Alpha2:		0.065
Tau:		0.015
Noise (RawQ):	0.900
Scale Factor (SF):	20.572
TGT Value:		500
Norm Factor (NF):	1.000
______________________________________________________________________

Background:
	Avg: 27.67	Std: 0.13	Min: 27.40	Max: 28.20
Noise:
	Avg: 0.92	Std: 0.03	Min: 0.80	Max: 1.00
Corner+
	Avg: 41		Count: 32
Corner-
	Avg: 11672		Count: 32
Central-
	Avg: 10212		Count: 9
______________________________________________________________________

The following data represents probe sets that exceed the probe pair threshold 
and are not called "No Call".

Total Probe Sets:	22810
Number Present:	10106	44.3%
Number Absent:	12343	54.1%
Number Marginal:	361	1.6%

Average Signal (P):	1751.1
Average Signal (A):	59.5
Average Signal (M):	181.3
Average Signal (All):	810.9
______________________________________________________________________

Housekeeping Controls:
Probe Set		Sig(5')	Det(5')	Sig(M')	Det(M')	Sig(3')	Det(3')	Sig(all)	Sig(3'/5')
AFFX-R2-AT-ACTIN	7317.7	P	632.2	P	4422.2	P	4124.02	0.60
AFFX-R2-AT-GAPDH	2272.2	P	 	 	3100.0	P	2686.10	1.36
AFFX-R2-AT-UBQ	8408.2	P	 	 	38168.9	P	23288.59	4.54
AFFX-ATHAL-ACTIN	363.9	P	271.6	P	3277.7	P	1304.41	9.01
AFFX-ATHAL-GAPDH	798.9	P	2386.5	P	6660.2	P	3281.89	8.34
AFFX-ATHAL-UBQ	3834.2	P	5926.2	P	33423.1	P	14394.46	8.72
______________________________________________________________________

Spike Controls:
Probe Set		Sig(5')	Det(5')	Sig(M')	Det(M')	Sig(3')	Det(3')	Sig(all)	Sig(3'/5')
AFFX-BIOB		7268.7	P	11225.5	P	9202.6	P	9232.27	1.27
AFFX-BIOC		23473.0	P	 	 	14252.9	P	18862.94	0.61
AFFX-BIOD		33145.5	P	 	 	66057.3	P	49601.40	1.99
AFFX-CRE		129306.2	P	 	 	187577.1	P	158441.64	1.45
AFFX-DAP		67.0	A	20.3	A	11.0	A	32.78	0.16
AFFX-LYS		20.2	A	23.0	A	17.7	A	20.30	0.88
AFFX-PHE		12.2	A	9.2	A	88.8	A	36.72	7.27
AFFX-THR		4.7	A	25.3	A	83.9	A	37.98	17.76
AFFX-TRP		8.7	A	16.0	A	8.7	A	11.12	1.00
AFFX-R2-EC-BIOB	11396.7	P	12810.7	P	11543.0	P	11916.80	1.01
AFFX-R2-EC-BIOC	35575.1	P	 	 	35720.2	P	35647.65	1.00
AFFX-R2-EC-BIOD	68638.0	P	 	 	89652.5	P	79145.28	1.31
AFFX-R2-P1-CRE	194055.6	P	 	 	216761.2	P	205408.42	1.12
AFFX-R2-BS-DAP	5.2	A	38.5	A	38.4	A	27.35	7.45
AFFX-R2-BS-LYS	46.1	A	28.7	A	43.6	A	39.44	0.95
AFFX-R2-BS-PHE	56.2	A	3.0	A	35.3	A	31.50	0.63
AFFX-R2-BS-THR	130.4	P	4.8	A	11.0	A	48.77	0.08
______________________________________________________________________