Report Type: Expression Report Date: 07:23PM 11/14/2007 ______________________________________________________________________ Filename: Arabidopsis LcCLE2.CHP Probe Array Type: ATH1-121501 Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 0.990 Scale Factor (SF): 10.563 TGT Value: 500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 29.26 Std: 0.29 Min: 28.70 Max: 30.10 Noise: Avg: 0.95 Std: 0.03 Min: 0.90 Max: 1.10 Corner+ Avg: 148 Count: 32 Corner- Avg: 12281 Count: 32 Central- Avg: 10038 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 22810 Number Present: 11911 52.2% Number Absent: 10561 46.3% Number Marginal: 338 1.5% Average Signal (P): 1441.5 Average Signal (A): 33.3 Average Signal (M): 115.0 Average Signal (All): 769.8 ______________________________________________________________________ Housekeeping Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-R2-AT-ACTIN 17403.6 P 3494.0 P 17904.9 P 12934.18 1.03 AFFX-R2-AT-GAPDH 7263.8 P 10675.5 P 8969.67 1.47 AFFX-R2-AT-UBQ 4178.7 P 19501.7 P 11840.19 4.67 AFFX-ATHAL-ACTIN 541.5 P 1606.2 P 10566.2 P 4237.96 19.51 AFFX-ATHAL-GAPDH 2238.4 P 7856.8 P 16017.2 P 8704.12 7.16 AFFX-ATHAL-UBQ 1951.4 P 4161.5 P 20010.0 P 8707.63 10.25 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BIOB 4413.1 P 7446.8 P 6269.6 P 6043.17 1.42 AFFX-BIOC 14438.6 P 8292.6 P 11365.58 0.57 AFFX-BIOD 22765.8 P 41009.5 P 31887.67 1.80 AFFX-CRE 83574.6 P 103986.8 P 93780.69 1.24 AFFX-DAP 15.5 A 3.0 A 22.2 A 13.54 1.43 AFFX-LYS 30.6 A 9.2 A 29.3 A 23.03 0.96 AFFX-PHE 7.7 A 3.8 A 5.1 A 5.55 0.66 AFFX-THR 31.6 A 27.4 A 19.7 A 26.25 0.62 AFFX-TRP 8.0 A 5.0 A 4.4 A 5.81 0.55 AFFX-R2-EC-BIOB 7107.6 P 8013.6 P 7910.9 P 7677.36 1.11 AFFX-R2-EC-BIOC 19849.9 P 20189.0 P 20019.49 1.02 AFFX-R2-EC-BIOD 46912.5 P 52942.6 P 49927.52 1.13 AFFX-R2-P1-CRE 103680.4 P 133259.7 P 118470.05 1.29 AFFX-R2-BS-DAP 22.3 A 11.3 A 22.5 A 18.70 1.01 AFFX-R2-BS-LYS 3.8 A 2.1 A 33.9 A 13.27 8.99 AFFX-R2-BS-PHE 30.0 A 7.9 A 14.9 A 17.61 0.50 AFFX-R2-BS-THR 9.7 A 17.0 A 18.9 A 15.18 1.95 ______________________________________________________________________