Report Type: Expression Report Date: 07:23PM 11/14/2007 ______________________________________________________________________ Filename: Arabidopsis LcCLE3.CHP Probe Array Type: ATH1-121501 Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 1.020 Scale Factor (SF): 15.613 TGT Value: 500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 29.40 Std: 0.17 Min: 29.10 Max: 30.00 Noise: Avg: 0.95 Std: 0.03 Min: 0.90 Max: 1.10 Corner+ Avg: 163 Count: 32 Corner- Avg: 10690 Count: 32 Central- Avg: 8516 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 22810 Number Present: 11124 48.8% Number Absent: 11360 49.8% Number Marginal: 326 1.4% Average Signal (P): 1550.9 Average Signal (A): 49.8 Average Signal (M): 157.2 Average Signal (All): 783.4 ______________________________________________________________________ Housekeeping Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-R2-AT-ACTIN 20531.2 P 3299.9 P 14861.4 P 12897.51 0.72 AFFX-R2-AT-GAPDH 6827.0 P 11681.8 P 9254.42 1.71 AFFX-R2-AT-UBQ 4740.8 P 28674.5 P 16707.65 6.05 AFFX-ATHAL-ACTIN 993.5 P 1495.1 P 11893.9 P 4794.16 11.97 AFFX-ATHAL-GAPDH 3018.6 P 6636.8 P 17434.8 P 9030.07 5.78 AFFX-ATHAL-UBQ 3090.6 P 7133.2 P 27437.6 P 12553.78 8.88 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BIOB 5402.7 P 9942.1 P 7190.5 P 7511.73 1.33 AFFX-BIOC 17736.1 P 10077.9 P 13907.00 0.57 AFFX-BIOD 26811.7 P 48081.6 P 37446.62 1.79 AFFX-CRE 99597.1 P 121376.3 P 110486.70 1.22 AFFX-DAP 72.8 A 8.2 A 62.2 A 47.77 0.85 AFFX-LYS 67.7 A 13.3 A 65.1 A 48.71 0.96 AFFX-PHE 41.8 A 10.9 A 8.7 A 20.49 0.21 AFFX-THR 50.9 A 44.3 A 105.3 A 66.85 2.07 AFFX-TRP 8.4 A 42.2 A 6.2 A 18.96 0.74 AFFX-R2-EC-BIOB 6942.9 P 7265.9 P 7442.6 P 7217.16 1.07 AFFX-R2-EC-BIOC 20618.0 P 22685.7 P 21651.82 1.10 AFFX-R2-EC-BIOD 39961.7 P 48866.7 P 44414.16 1.22 AFFX-R2-P1-CRE 102892.9 P 123874.9 P 113383.92 1.20 AFFX-R2-BS-DAP 4.2 A 44.0 A 41.4 A 29.88 9.76 AFFX-R2-BS-LYS 8.3 A 28.1 A 38.6 A 25.00 4.66 AFFX-R2-BS-PHE 66.6 A 15.0 A 15.7 A 32.44 0.24 AFFX-R2-BS-THR 54.4 A 10.1 A 26.8 A 30.44 0.49 ______________________________________________________________________