Report Type:	Expression Report
Date:          	02:41PM 05/24/2007
______________________________________________________________________

Filename:		Soybean Ovule-Integuments2.CHP
Probe Array Type:	Soybean
Algorithm:		Statistical
Probe Pair Thr:	8
Controls:		Antisense
______________________________________________________________________

Alpha1:		0.05
Alpha2:		0.065
Tau:		0.015
Noise (RawQ):	2.020
Scale Factor (SF):	6.993
TGT Value:		500
Norm Factor (NF):	1.000
______________________________________________________________________

Background:
	Avg: 65.06	Std: 0.73	Min: 62.70	Max: 66.80
Noise:
	Avg: 3.20	Std: 0.07	Min: 3.00	Max: 3.40
Corner+
	Avg: 620		Count: 32
Corner-
	Avg: 19262		Count: 32
Central-
	Avg: 20360		Count: 9
______________________________________________________________________

The following data represents probe sets that exceed the probe pair threshold 
and are not called "No Call".

Total Probe Sets:	61078
Number Present:	18240	29.9%
Number Absent:	42052	68.8%
Number Marginal:	786	1.3%

Average Signal (P):	2914.4
Average Signal (A):	76.1
Average Signal (M):	288.8
Average Signal (All):	926.5
______________________________________________________________________

Spike Controls:
Probe Set		Sig(5')	Det(5')	Sig(M')	Det(M')	Sig(3')	Det(3')	Sig(all)	Sig(3'/5')
AFFX-BIOB		1606.7	P	3032.6	P	1970.7	P	2203.35	1.23
AFFX-BIOC		6619.6	P	 	 	5063.3	P	5841.43	0.76
AFFX-BIOD		10636.7	P	 	 	21029.8	P	15833.26	1.98
AFFX-CRE		62230.9	P	 	 	68913.4	P	65572.16	1.11
AFFX-DAP		104.0	A	11.0	A	8.0	A	40.99	0.08
AFFX-LYS		24.3	A	19.3	A	10.5	A	18.07	0.43
AFFX-PHE		12.4	A	15.2	A	62.4	A	29.99	5.04
AFFX-THR		5.8	A	49.7	A	7.7	A	21.05	1.34
AFFX-TRP		44.4	A	11.7	A	16.3	A	24.16	0.37
AFFX-R2-EC-BIOB	3410.2	P	3290.5	P	2730.9	P	3143.85	0.80
AFFX-R2-EC-BIOC	7636.1	P	 	 	7552.9	P	7594.54	0.99
AFFX-R2-EC-BIOD	28101.7	P	 	 	38677.8	P	33389.73	1.38
AFFX-R2-P1-CRE	68913.4	P	 	 	90299.1	P	79606.24	1.31
AFFX-R2-BS-DAP	36.6	A	11.5	A	60.7	A	36.24	1.66
AFFX-R2-BS-LYS	3.1	A	67.7	A	148.6	A	73.10	48.15
AFFX-R2-BS-PHE	24.1	A	8.1	A	172.5	A	68.23	7.16
AFFX-R2-BS-THR	127.8	A	95.4	A	36.8	A	86.67	0.29
______________________________________________________________________

