Report Type: Expression Report Date: 05:20PM 06/04/2008 ______________________________________________________________________ Filename: Arabidopsis pgCZE2.CHP Probe Array Type: ATH1-121501 Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 1.130 Scale Factor (SF): 29.983 TGT Value: 500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 29.74 Std: 0.28 Min: 29.10 Max: 30.60 Noise: Avg: 1.03 Std: 0.03 Min: 0.90 Max: 1.10 Corner+ Avg: 225 Count: 32 Corner- Avg: 17386 Count: 32 Central- Avg: 14858 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 22810 Number Present: 7542 33.1% Number Absent: 14945 65.5% Number Marginal: 323 1.4% Average Signal (P): 2779.7 Average Signal (A): 84.0 Average Signal (M): 294.7 Average Signal (All): 978.3 ______________________________________________________________________ Housekeeping Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-R2-AT-ACTIN 3338.9 P 868.9 P 3376.5 P 2528.11 1.01 AFFX-R2-AT-GAPDH 2432.3 P 3018.0 P 2725.19 1.24 AFFX-R2-AT-UBQ 4270.1 P 23058.8 P 13664.48 5.40 AFFX-ATHAL-ACTIN 303.5 P 484.6 P 2007.5 P 931.88 6.62 AFFX-ATHAL-GAPDH 640.6 P 1357.4 P 8448.4 P 3482.13 13.19 AFFX-ATHAL-UBQ 2499.5 P 4252.7 P 22511.5 P 9754.57 9.01 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BIOB 12671.3 P 26657.8 P 21022.4 P 20117.16 1.66 AFFX-BIOC 48323.0 P 25730.2 P 37026.62 0.53 AFFX-BIOD 61520.3 P 131225.0 P 96372.66 2.13 AFFX-CRE 238307.9 P 335881.5 P 287094.69 1.41 AFFX-DAP 12.4 A 16.7 A 19.7 A 16.26 1.59 AFFX-LYS 12.3 A 40.8 A 12.2 A 21.76 0.99 AFFX-PHE 156.7 A 9.6 A 53.2 A 73.19 0.34 AFFX-THR 52.3 A 47.2 A 83.4 A 60.93 1.60 AFFX-TRP 45.4 A 28.5 A 20.9 A 31.58 0.46 AFFX-R2-EC-BIOB 16857.8 P 19610.3 P 20943.8 P 19137.28 1.24 AFFX-R2-EC-BIOC 55000.8 P 59128.5 P 57064.64 1.08 AFFX-R2-EC-BIOD 106316.2 P 149367.3 P 127841.73 1.40 AFFX-R2-P1-CRE 264503.3 P 324807.7 P 294655.50 1.23 AFFX-R2-BS-DAP 8.8 A 3.9 A 14.7 A 9.12 1.67 AFFX-R2-BS-LYS 88.4 A 10.0 A 7.3 A 35.22 0.08 AFFX-R2-BS-PHE 5.5 A 16.3 A 13.7 A 11.84 2.50 AFFX-R2-BS-THR 23.4 A 8.6 A 69.5 A 33.83 2.97 ______________________________________________________________________