Report Type:	Expression Report
Date:          	07:00PM 12/02/2008
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Filename:		Arabidopsis mgPEN-2.CHP
Probe Array Type:	ATH1-121501
Algorithm:		Statistical
Probe Pair Thr:	8
Controls:		Antisense
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Alpha1:		0.05
Alpha2:		0.065
Tau:		0.015
Noise (RawQ):	1.270
Scale Factor (SF):	13.658
TGT Value:		500
Norm Factor (NF):	1.000
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Background:
	Avg: 31.56	Std: 0.24	Min: 31.10	Max: 32.30
Noise:
	Avg: 1.15	Std: 0.04	Min: 1.00	Max: 1.20
Corner+
	Avg: 116		Count: 32
Corner-
	Avg: 20593		Count: 32
Central-
	Avg: 19662		Count: 9
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The following data represents probe sets that exceed the probe pair threshold 
and are not called "No Call".

Total Probe Sets:	22810
Number Present:	11751	51.5%
Number Absent:	10762	47.2%
Number Marginal:	297	1.3%

Average Signal (P):	1592.2
Average Signal (A):	45.9
Average Signal (M):	144.5
Average Signal (All):	843.8
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Housekeeping Controls:
Probe Set		Sig(5')	Det(5')	Sig(M')	Det(M')	Sig(3')	Det(3')	Sig(all)	Sig(3'/5')
AFFX-R2-AT-ACTIN	13942.9	P	2450.1	P	10074.0	P	8822.37	0.72
AFFX-R2-AT-GAPDH	8581.4	P	 	 	8584.9	P	8583.12	1.00
AFFX-R2-AT-UBQ	4511.2	P	 	 	24007.5	P	14259.35	5.32
AFFX-ATHAL-ACTIN	547.7	P	1606.9	P	7223.9	P	3126.15	13.19
AFFX-ATHAL-GAPDH	4222.7	P	7784.2	P	15324.4	P	9110.45	3.63
AFFX-ATHAL-UBQ	2728.5	P	4375.4	P	18492.5	P	8532.15	6.78
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Spike Controls:
Probe Set		Sig(5')	Det(5')	Sig(M')	Det(M')	Sig(3')	Det(3')	Sig(all)	Sig(3'/5')
AFFX-BIOB		6123.2	P	11000.0	P	9065.6	P	8729.61	1.48
AFFX-BIOC		18459.3	P	 	 	10715.7	P	14587.51	0.58
AFFX-BIOD		22861.6	P	 	 	52773.9	P	37817.73	2.31
AFFX-CRE		126692.3	P	 	 	154393.8	P	140543.05	1.22
AFFX-DAP		120.3	P	41.5	A	14.2	A	58.64	0.12
AFFX-LYS		3.7	A	15.9	A	4.5	A	8.05	1.23
AFFX-PHE		8.9	A	22.5	A	16.0	A	15.79	1.81
AFFX-THR		3.9	A	22.4	A	88.4	A	38.24	22.72
AFFX-TRP		41.9	A	39.9	A	60.9	A	47.57	1.45
AFFX-R2-EC-BIOB	9534.4	P	10534.0	P	9655.1	P	9907.86	1.01
AFFX-R2-EC-BIOC	21499.7	P	 	 	22222.6	P	21861.17	1.03
AFFX-R2-EC-BIOD	58541.6	P	 	 	71714.2	P	65127.86	1.23
AFFX-R2-P1-CRE	155236.4	P	 	 	176590.6	P	165913.50	1.14
AFFX-R2-BS-DAP	2.2	A	4.9	A	47.6	A	18.23	21.59
AFFX-R2-BS-LYS	10.6	A	4.6	A	79.5	A	31.55	7.48
AFFX-R2-BS-PHE	59.5	A	27.6	A	64.2	A	50.44	1.08
AFFX-R2-BS-THR	67.7	A	7.0	A	125.0	A	66.57	1.85
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