Report Type:	Expression Report
Date:          	07:00PM 12/02/2008
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Filename:		Arabidopsis mgPEN-3.CHP
Probe Array Type:	ATH1-121501
Algorithm:		Statistical
Probe Pair Thr:	8
Controls:		Antisense
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Alpha1:		0.05
Alpha2:		0.065
Tau:		0.015
Noise (RawQ):	1.250
Scale Factor (SF):	13.987
TGT Value:		500
Norm Factor (NF):	1.000
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Background:
	Avg: 31.79	Std: 0.26	Min: 31.30	Max: 32.80
Noise:
	Avg: 1.20	Std: 0.03	Min: 1.10	Max: 1.30
Corner+
	Avg: 122		Count: 32
Corner-
	Avg: 24009		Count: 32
Central-
	Avg: 22343		Count: 9
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The following data represents probe sets that exceed the probe pair threshold 
and are not called "No Call".

Total Probe Sets:	22810
Number Present:	11562	50.7%
Number Absent:	10918	47.9%
Number Marginal:	330	1.4%

Average Signal (P):	1582.8
Average Signal (A):	54.4
Average Signal (M):	171.1
Average Signal (All):	830.8
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Housekeeping Controls:
Probe Set		Sig(5')	Det(5')	Sig(M')	Det(M')	Sig(3')	Det(3')	Sig(all)	Sig(3'/5')
AFFX-R2-AT-ACTIN	13658.2	P	2195.4	P	11390.7	P	9081.43	0.83
AFFX-R2-AT-GAPDH	9256.4	P	 	 	11865.8	P	10561.10	1.28
AFFX-R2-AT-UBQ	3644.9	P	 	 	22522.6	P	13083.74	6.18
AFFX-ATHAL-ACTIN	597.7	P	1753.2	P	8232.6	P	3527.82	13.77
AFFX-ATHAL-GAPDH	4384.9	P	7905.3	P	20097.6	P	10795.94	4.58
AFFX-ATHAL-UBQ	2758.1	P	4569.7	P	21942.7	P	9756.82	7.96
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Spike Controls:
Probe Set		Sig(5')	Det(5')	Sig(M')	Det(M')	Sig(3')	Det(3')	Sig(all)	Sig(3'/5')
AFFX-BIOB		7235.5	P	13377.4	P	11345.9	P	10652.92	1.57
AFFX-BIOC		20744.2	P	 	 	12807.4	P	16775.81	0.62
AFFX-BIOD		27390.9	P	 	 	60970.2	P	44180.55	2.23
AFFX-CRE		155658.9	P	 	 	188002.0	P	171830.47	1.21
AFFX-DAP		78.1	A	41.5	A	12.9	A	44.19	0.17
AFFX-LYS		17.6	A	13.4	A	3.9	A	11.65	0.22
AFFX-PHE		25.5	A	8.9	A	21.3	A	18.57	0.83
AFFX-THR		56.2	A	59.9	A	124.6	P	80.22	2.22
AFFX-TRP		24.5	A	50.1	A	9.0	A	27.87	0.37
AFFX-R2-EC-BIOB	9704.6	P	9368.9	P	9949.8	P	9674.46	1.03
AFFX-R2-EC-BIOC	21277.5	P	 	 	23270.4	P	22273.94	1.09
AFFX-R2-EC-BIOD	65645.0	P	 	 	68122.6	P	66883.78	1.04
AFFX-R2-P1-CRE	169159.1	P	 	 	178998.5	P	174078.78	1.06
AFFX-R2-BS-DAP	3.1	A	13.7	A	8.7	A	8.47	2.81
AFFX-R2-BS-LYS	42.6	A	18.5	A	10.6	A	23.91	0.25
AFFX-R2-BS-PHE	47.4	A	7.2	A	49.6	A	34.71	1.05
AFFX-R2-BS-THR	15.5	A	51.3	A	136.8	A	67.86	8.84
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