Report Type: Expression Report Date: 07:11PM 11/25/2008 ______________________________________________________________________ Filename: Arabidopsis mgCZSC-2.CHP Probe Array Type: ATH1-121501 Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 1.360 Scale Factor (SF): 13.329 TGT Value: 500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 31.61 Std: 0.53 Min: 30.90 Max: 34.30 Noise: Avg: 1.15 Std: 0.12 Min: 1.00 Max: 1.80 Corner+ Avg: 126 Count: 32 Corner- Avg: 22828 Count: 32 Central- Avg: 20150 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 22810 Number Present: 11721 51.4% Number Absent: 10783 47.3% Number Marginal: 306 1.3% Average Signal (P): 1483.7 Average Signal (A): 43.6 Average Signal (M): 157.2 Average Signal (All): 785.1 ______________________________________________________________________ Housekeeping Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-R2-AT-ACTIN 13252.4 P 2035.4 P 7831.6 P 7706.44 0.59 AFFX-R2-AT-GAPDH 4778.9 P 4483.2 P 4631.04 0.94 AFFX-R2-AT-UBQ 6559.4 P 26220.7 P 16390.07 4.00 AFFX-ATHAL-ACTIN 479.4 P 1346.9 P 6312.3 P 2712.88 13.17 AFFX-ATHAL-GAPDH 2508.7 P 3592.6 P 8909.6 P 5003.62 3.55 AFFX-ATHAL-UBQ 3121.7 P 3431.1 P 19471.3 P 8674.73 6.24 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BIOB 6246.5 P 11230.8 P 10445.1 P 9307.45 1.67 AFFX-BIOC 17496.8 P 12238.5 P 14867.67 0.70 AFFX-BIOD 27539.5 P 61505.0 P 44522.28 2.23 AFFX-CRE 181301.3 P 214664.0 P 197982.64 1.18 AFFX-DAP 61.3 A 11.7 A 41.2 A 38.05 0.67 AFFX-LYS 4.2 A 9.0 A 6.9 A 6.70 1.63 AFFX-PHE 8.7 A 30.3 A 20.2 A 19.70 2.32 AFFX-THR 5.5 A 25.9 A 78.0 A 36.47 14.06 AFFX-TRP 77.0 A 23.0 A 45.2 A 48.38 0.59 AFFX-R2-EC-BIOB 9471.1 P 12006.6 P 11080.0 P 10852.59 1.17 AFFX-R2-EC-BIOC 24930.4 P 23480.7 P 24205.54 0.94 AFFX-R2-EC-BIOD 76434.9 P 92123.1 P 84279.01 1.21 AFFX-R2-P1-CRE 205241.7 P 226598.9 P 215920.28 1.10 AFFX-R2-BS-DAP 3.0 A 35.1 A 2.4 A 13.51 0.78 AFFX-R2-BS-LYS 22.6 A 81.6 A 67.3 A 57.19 2.98 AFFX-R2-BS-PHE 26.2 A 5.6 A 2.9 A 11.58 0.11 AFFX-R2-BS-THR 74.1 P 3.1 A 89.1 P 55.46 1.20 ______________________________________________________________________