Report Type:	Expression Report
Date:          	07:11PM 11/25/2008
______________________________________________________________________

Filename:		Arabidopsis mgCZSC-3.CHP
Probe Array Type:	ATH1-121501
Algorithm:		Statistical
Probe Pair Thr:	8
Controls:		Antisense
______________________________________________________________________

Alpha1:		0.05
Alpha2:		0.065
Tau:		0.015
Noise (RawQ):	1.600
Scale Factor (SF):	12.638
TGT Value:		500
Norm Factor (NF):	1.000
______________________________________________________________________

Background:
	Avg: 34.77	Std: 0.73	Min: 33.20	Max: 38.30
Noise:
	Avg: 1.52	Std: 0.14	Min: 1.30	Max: 2.20
Corner+
	Avg: 194		Count: 32
Corner-
	Avg: 39229		Count: 32
Central-
	Avg: 39578		Count: 9
______________________________________________________________________

The following data represents probe sets that exceed the probe pair threshold 
and are not called "No Call".

Total Probe Sets:	22810
Number Present:	11905	52.2%
Number Absent:	10569	46.3%
Number Marginal:	336	1.5%

Average Signal (P):	1420.0
Average Signal (A):	61.2
Average Signal (M):	191.4
Average Signal (All):	772.3
______________________________________________________________________

Housekeeping Controls:
Probe Set		Sig(5')	Det(5')	Sig(M')	Det(M')	Sig(3')	Det(3')	Sig(all)	Sig(3'/5')
AFFX-R2-AT-ACTIN	19864.9	P	1742.8	P	5980.8	P	9196.18	0.30
AFFX-R2-AT-GAPDH	5884.9	P	 	 	8238.5	P	7061.71	1.40
AFFX-R2-AT-UBQ	6677.8	P	 	 	23680.5	P	15179.15	3.55
AFFX-ATHAL-ACTIN	1118.8	P	1064.5	P	6139.0	P	2774.12	5.49
AFFX-ATHAL-GAPDH	3753.4	P	4366.5	P	13234.0	P	7117.97	3.53
AFFX-ATHAL-UBQ	3939.5	P	6130.4	P	23865.0	P	11311.63	6.06
______________________________________________________________________

Spike Controls:
Probe Set		Sig(5')	Det(5')	Sig(M')	Det(M')	Sig(3')	Det(3')	Sig(all)	Sig(3'/5')
AFFX-BIOB		8909.1	P	15691.8	P	13184.3	P	12595.07	1.48
AFFX-BIOC		28974.6	P	 	 	17463.9	P	23219.24	0.60
AFFX-BIOD		35017.3	P	 	 	75811.4	P	55414.33	2.16
AFFX-CRE		199769.8	P	 	 	220043.0	P	209906.41	1.10
AFFX-DAP		83.5	A	16.7	A	39.6	A	46.58	0.47
AFFX-LYS		22.9	A	130.9	A	18.4	A	57.40	0.80
AFFX-PHE		35.3	A	4.1	A	26.3	A	21.88	0.75
AFFX-THR		41.2	A	7.3	A	123.8	A	57.44	3.00
AFFX-TRP		119.3	A	51.4	A	14.3	A	61.65	0.12
AFFX-R2-EC-BIOB	12168.8	P	13220.3	P	13401.2	P	12930.09	1.10
AFFX-R2-EC-BIOC	29801.6	P	 	 	33925.7	P	31863.67	1.14
AFFX-R2-EC-BIOD	79087.2	P	 	 	99231.8	P	89159.52	1.25
AFFX-R2-P1-CRE	195817.4	P	 	 	235283.4	P	215550.41	1.20
AFFX-R2-BS-DAP	10.1	A	68.9	P	3.1	A	27.41	0.31
AFFX-R2-BS-LYS	25.5	A	8.4	A	15.0	A	16.29	0.59
AFFX-R2-BS-PHE	109.5	A	4.2	A	26.8	A	46.82	0.24
AFFX-R2-BS-THR	81.2	A	17.0	A	38.1	A	45.44	0.47
______________________________________________________________________

